Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2110 ATGGCATCACTGATCGGAGCCATGGGAAGCACCAGCTTTACTACGCATGTCATTCCCCATTTGGAGCTCCATAGTTGCTGTTTCAGGATACTCGGGTCGATCCAGACCCGGTTTTCTGCTCCTCGGTTCTGCAACTCCTCGGGGAGTCCGAGGTTGAGGTACGGGGTCTCGCGGAGGAATACGAGATTTGGTAGAGTTATCTGTTTTGCTGTCGATGAGGACTTGAGAGAGAATCGACAGGAGTTGAGTAGAAGCGGAAGTAGGGTTGGGTCAGCTATTGAAGATGGGTCGGAACTGGTTGATAGTAGAAGAGAAGAAACACTGGAAAATTCTAGGCAAGATGGTGAAGGAAGTGCATTATATGATTTCCTTTATCCTAATAAAGAACTTCTTCCTGATGATAAGGAAATGAACATATTTGATCATCTTGAAGAACTGCGACAGAGAATCTTTGTATCAGTTCTAGCAGTTGGAGGAGCCATTTTAGGATGCTTCGCATTTTCAAAAGAACTTATAATGCTTCTTGAAGCTCCTGTTAAATCACAGGGTGTGAGATTTCTTCAGCTAGCTCCTGGGGAGTTTTTCTTCACAACTATAAAGGTGTCTGGATACTGTGGCCTCCTCTTGGGAAGTCCTGTCATTCTCTATGAAATCATAGCCTTTGTGCTTCCTGGTCTAACAAGAGCTGAAAGAAGGTTTCTGGGGCCAATTGTTTTGGGTTCATCAGTTCTTTTCTATGCTGGAATAACCTTCTCCTACGTAGTTCTTACACCTGCAGCATTAAACTTCTTCGTTAATTATGCTGAAGGGGCTGTTGAATCGCTGTGGTCCATTGATCAATACTTTGAGTTTGTACTAGTGCTTATGTTCAGTACTGGCTTGTCTTTCCAGGTGCCTGTCATACAATTTCTATTAGGACAAGTTGGGCTTGTGTCTGGAGACCAGATGCTGTCAGTTTGGAGGTATGTTGTGGTTGGTGCAGTGGTGGCGGCTGCTGTGCTTACTCCTTCCACTGACCCCCTGACTCAAGTTCTTCTAGCCGCTCCACTGTTAGGTCTTTACCTTGGTGGTGCATGGATGGTCAAGCTCACAGGACGGTGA 1101 0.455 MASLIGAMGSTSFTTHVIPHLELHSCCFRILGSIQTRFSAPRFCNSSGSPRLRYGVSRRNTRFGRVICFAVDEDLRENRQELSRSGSRVGSAIEDGSELVDSRREETLENSRQDGEGSALYDFLYPNKELLPDDKEMNIFDHLEELRQRIFVSVLAVGGAILGCFAFSKELIMLLEAPVKSQGVRFLQLAPGEFFFTTIKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGITFSYVVLTPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQVGLVSGDQMLSVWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWMVKLTGR 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2110 366 MobiDBLite consensus disorder prediction 97 112 - -
Dere09g2110 366 NCBIfam twin-arginine translocase subunit TatC 139 354 IPR002033 GO:0016020
Dere09g2110 366 MobiDBLite consensus disorder prediction 86 114 - -
Dere09g2110 366 ProSitePatterns TatC family signature. 281 300 IPR019820 -
Dere09g2110 366 Pfam Sec-independent protein translocase protein (TatC) 141 349 IPR002033 GO:0016020
Dere09g2110 366 PRINTS Bacterial Sec-independent translocation TatC protein family signature 212 230 IPR002033 GO:0016020
Dere09g2110 366 PRINTS Bacterial Sec-independent translocation TatC protein family signature 230 256 IPR002033 GO:0016020
Dere09g2110 366 PRINTS Bacterial Sec-independent translocation TatC protein family signature 138 165 IPR002033 GO:0016020
Dere09g2110 366 PRINTS Bacterial Sec-independent translocation TatC protein family signature 281 309 IPR002033 GO:0016020
Dere09g2110 366 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC 118 366 IPR002033 GO:0016020
Dere09g2110 366 Hamap Sec-independent protein translocase protein TatC [tatC]. 134 366 IPR002033 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2110 Dere-ChrDere09 29829725 29833926 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g2110 09 29829725 29833926 Dere09g2110 09 29829725 29833926 ECH