Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2093 ATGGCACTCCCATCTCATGGGGTTGGAAAAGGTGGTGCTTCACTTGATTCTGGCCATGCCCGTCTTCATGAGCTCGGCTACAAACAAGAGCTCAAGCGTGACCTATCGGTCCTTTCAAATTTTGCGTTTTCATTTTCTATCATATCAGTGCTCACTGGTATCACTACCCTTTACAACAATGGGTTAAAATATGGGGGTCCTGTATCTGTCGTGTATGGTTGGTTCATAGCTAGTGCTTTCACTTTGTTTGTTGGGTTGTCGATGGCTGAAATTTGTTCATCTTACCCGACTTCTGGTGGGCTCTACTATTGGAGTGCTAAGCTTGCTGGCCCCGCATGGGCACCTCTTGCCTCCTGGATTACTGGCTGGTTCAATATTGTTGGTCAGTGGGCTGTGACAACAAGTGTAGATTTTTCACTTGCACAACTAATTCAGGTTATCATTCTCCTTAGTACTGGTGGGAAAAATGGCGGTGGATATGAGGCATCTAAGTATGTCATTATCGGTTTACATGGGGGAATTTTGATCCTACATGCTATAATAAACAGCCTTCCTATCTCATTGTTATCGTTCTTTGGGCAGTTAGCTGCTATCTGGAATGTCCTAGGTGTCTTCTTGCTTATGATTCTCATTCCATCTGTTGCAACGGAAAGAGCTAGTGCCATGTTTGTTTTCACTCATTTCAATACTGATAATGGGGATGGAATCAGCAGCAGACCATACATATTTCTTCTTGGACTTCTAATGAGCCAGTACACCCTAACTGGATATGATGCATCTGCTCATATGACAGAGGAGACCAAGGGTGCTGACAGAAATGGACCAAAAGGAATTATCAGTTCTATTGGGATATCTATTATTGTTGGATGTGGTTACATACTTGGCATTACCTTCGCGGTTACTGACATCCCTTACCTTTTGAGTGAAAATAACGATGCTGGTGGGTATGCCATTGCTGAAATATTTTATCTAGCATTCAAGAGAAGGTATGGCAATGGAGTTGGGGGGATTATTTGCCTGGGAGTGATTGCTGTCGCCATATTTTTCTGTGGTATGAGTTCAGTTACCAGCAACTCAAGGATGGCTTATGCTTTCTCTAGAGATGGAGCCATGCCATTTTCATCATTTTGGCATAAAGTAAATAAGCAGGATGTTCCCATAAATGCAGTTTGGCTTTCTGCTTTTACAGCATTTTGCATGGCACTACCGTCTCTCGGAAGCATAGTGGCATTTGACGCCATGGTGTCCATAGCAACGATTGGCCTCTATATTGCTTATGCCCTTCCTATCTTCTTTAGGGTGACTTTGGCACAGAACATATCACCGGGGCCCTTCAACTTGGGTCGCTATGGGATCATTGTTGGCTGGGTAGCAGTTCTTTGGGTGGTGACCATCTCCATCCTCTTCTCGTTGCCTGTTTCTTACCCAATAACTATTGAGACACTCAACTACACCCCAGCTGCAGTTGGATGTTTGTTGGTTCTTGTAGTTTCTTACTGGATAGTCAGTGGTCGGCATTGGTTTAAAGGTCCTGTAACCAATATAGATAGCTGA 1554 0.4382 MALPSHGVGKGGASLDSGHARLHELGYKQELKRDLSVLSNFAFSFSIISVLTGITTLYNNGLKYGGPVSVVYGWFIASAFTLFVGLSMAEICSSYPTSGGLYYWSAKLAGPAWAPLASWITGWFNIVGQWAVTTSVDFSLAQLIQVIILLSTGGKNGGGYEASKYVIIGLHGGILILHAIINSLPISLLSFFGQLAAIWNVLGVFLLMILIPSVATERASAMFVFTHFNTDNGDGISSRPYIFLLGLLMSQYTLTGYDASAHMTEETKGADRNGPKGIISSIGISIIVGCGYILGITFAVTDIPYLLSENNDAGGYAIAEIFYLAFKRRYGNGVGGIICLGVIAVAIFFCGMSSVTSNSRMAYAFSRDGAMPFSSFWHKVNKQDVPINAVWLSAFTAFCMALPSLGSIVAFDAMVSIATIGLYIAYALPIFFRVTLAQNISPGPFNLGRYGIIVGWVAVLWVVTISILFSLPVSYPITIETLNYTPAAVGCLLVLVVSYWIVSGRHWFKGPVTNIDS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2093 517 Gene3D Amino acid/polyamine transporter I 29 508 - -
Dere09g2093 517 FunFam Amino-acid permease BAT1 29 507 - -
Dere09g2093 517 NCBIfam amino acid permease 22 511 IPR004756 GO:0006865|GO:0016020
Dere09g2093 517 Pfam Amino acid permease 35 489 IPR002293 GO:0016020|GO:0022857|GO:0055085
Dere09g2093 517 PANTHER AMINO-ACID PERMEASE BAT1 15 516 - -
Dere09g2093 517 ProSitePatterns Amino acid permeases signature. 65 96 IPR004840 GO:0006865|GO:0016020|GO:0055085
Dere09g2093 517 PIRSF AA_transporter 22 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2093 Dere-ChrDere09 29501626 29512749 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2093 84 517 Organic Solute Cotransporters AT2G01170 78.161 0.0 661
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g2093 09 29501626 29512749 Dere09g2093 09 29501626 29512749 ECH