Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1982 ATGGCGCGTGGCCTCCAAGACCATCTCTCTGTGTGGCTTCAAAAGTCCACCGAAAGCGACTGTCTGGCATATCACGACACACGAATCTCTCTGCCTGTCTCTGGTTCGACTCCAAATATTCCAATACGATTCCTTTCTCTGTTAGCCGTTGAGTTTCACTTTTCGTCTTGGTGCTCAACTTTTCCTCTACGGCTATACCCCCATTATGACCGATTTTTCTTAGTTGATCTATGCGATGTTCCTCCATCGCTCCCAATGACGGACTCTGCCTCTTTCTCATCCACGTCCTCCGATTTCGGTTCTATCAACGCCGTCGATCAGAATGCGGGGCGAAGTCGGAGAAGTGGGGAAGCTAGTGAAGTCGTGATCTCCGGGCAAACGCGTCGGTGGCATGACGTTTTCTGGTTAGGAATATTTGTGATTCATTTGATTGGCCTGGGATTCCTTATGGGGCTTCTCGGGCTCAATAGGTTTAAGAAGAAGAATAGACTTAATATTGATAAGTATACTGCCCGGTTTTCGGAGAACGGAGCCGGTTTGACTGAGGATTTCTGGCCACTCTATGCTGTTGCTGGTGGAGTTGGGACTATTCTTGGATGGAGTTGGTTGTTGTTGTTGGGTTCTCGTGGCAGTCAAATGATGAAGGTCTCGGTTCACATCCTAACCACTTATCTTGCCGTGATCAGTGTTTTGTGTTTCTGGGCTAAACAGTTTTTCTGGGGAGTTTTTTTTGCCATTGGAGCAGCTCTGCAATTCCTTTACGTGATATCGGTCATAGACAGACTTCCATTTACCATGTTGGTTCTGCGAAAGGCTGTGAAGATGGTGTGGAGTCTTCCTGAGGTTATGAGATTGGCATATGCATTTATGCTTGTTGTGCTTTTATGGATGACCTTATGGTCTTTTGGAGCAGCTGGGGTTGTGGCTTCAAGCATGGGTGATGGTGGACGCTGGTGGCTTCTTGTGGTTCTCTCTATAAGCTTATTTTGGACGGGTGCAGTACTTTGTAATACAGTACATGTCATAGTGTCCGGGATGGTGTTTCTTGTTCTTATCCATGGGGGCAGAGAGGCAGCATCAATGCCGGCCAACTCTCTTGTGAAATCTATTCAGTATGCTTTAACAACATCTTTTGGCAGCATTTGTTATGGTTCATTATTTACAGCTGCTATCAGGACACTACGTTGGAAGATAAGGGGATTCAGGTCAAAGATTGGAAACAATGAGTGTTTGCTTTGCTGTGTTGATTTCCTTTTTCATCTTGTGGAGACTCTTGTCCGTTTCTTCAACAAGTATGCCTATGTTCAGATAGCTGTTTATGGTAAAAGCTTTAACCATTCAGCTAGAGATGCATGGGAGTTATTCCAGTCAACTGGAGTTGAAGCACTCGTGGCCTATGACTGTTCTGGTGCTGTCCTGCTAATGGGCACCATTTTCGGTGGGCTGATTACTGGAACTTGCTCTGGTGTTTGGGCGTGGATTAAATGGAGTGACCGAGTGATTATGATTGGGTCCACATCTATTTTGATGGGAATGGTCTTGGTTGGAGTGGCAGTGGTTGTTGTGGAAAGTGCTGTTACATCCATCTATATTTGCTATGCAGAAGACCCCTTATTGATTCATAGATGGGACGCCGAATTCTTCAACCAGATGTCTGAGACACTACATCAGCGGCTTCAACATAGGAGCGCACGGGCTCGGGAAGTTTTGATGCAATATCGACTCGATGGCCGGGTTCAAGAAAATGGTTCTATTTGA 1758 0.459 MARGLQDHLSVWLQKSTESDCLAYHDTRISLPVSGSTPNIPIRFLSLLAVEFHFSSWCSTFPLRLYPHYDRFFLVDLCDVPPSLPMTDSASFSSTSSDFGSINAVDQNAGRSRRSGEASEVVISGQTRRWHDVFWLGIFVIHLIGLGFLMGLLGLNRFKKKNRLNIDKYTARFSENGAGLTEDFWPLYAVAGGVGTILGWSWLLLLGSRGSQMMKVSVHILTTYLAVISVLCFWAKQFFWGVFFAIGAALQFLYVISVIDRLPFTMLVLRKAVKMVWSLPEVMRLAYAFMLVVLLWMTLWSFGAAGVVASSMGDGGRWWLLVVLSISLFWTGAVLCNTVHVIVSGMVFLVLIHGGREAASMPANSLVKSIQYALTTSFGSICYGSLFTAAIRTLRWKIRGFRSKIGNNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKSFNHSARDAWELFQSTGVEALVAYDCSGAVLLMGTIFGGLITGTCSGVWAWIKWSDRVIMIGSTSILMGMVLVGVAVVVVESAVTSIYICYAEDPLLIHRWDAEFFNQMSETLHQRLQHRSARAREVLMQYRLDGRVQENGSI 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1982 585 Pfam Plasma-membrane choline transporter 242 537 IPR007603 GO:0022857|GO:0055085
Dere09g1982 585 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 121 565 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1982 Dere-ChrDere09 26360905 26366041 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1982 09 26360905 26366041 Dere09g1982 09 26360905 26366041 ECH