Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1739 ATGATTATCAAAATGAATAAATGGTATGGTGGAGTTCTGATGGCCTCCTTGTTTATGTTGTTAATGCTTCTGATACTGAGATACGGGGTCATGAAAAACTCTATTGGTGAAGGCTATCTGACTATACCTGTCTCCCTTAATGGTACTAATCCTCTCAAATGGATAAATCCTGTGGTTCCACCAGCCGTTCAAAATCCAGAGGGTTCTTCTCAAGTGATTTCTGCTGACGTTGTTGTATCTACCCTCTTTACTCGAAGAAACATCTCAAAGGAAGAGCAACAAACTCTGCAGACATGGAACCAATTAAGACACTTAATTGATCATGCTCAGGGTTTACCTAATGCAGCTGAAGCTATCAAGGAAGCTTCAGGTGCATGGAATAGTCTCATGTACTCAGTTGAAGAGCAAAGACAAGGTCATGCAAATGACAGTTTAAATGGGAGCATGAGAGAGAAGCAATGTCCCCATTTTCTTAATAACATGAATTTAACAGGACTTGGCAATAGTAGTTACAAATTGCAATTTCCTTGTGGCCTGACACAAGGTTCTTCCATCACTATCATTGGCATTCCCAATGGTCTTCTAGGTAATTTTCGGATTGACTTGACTGGAGAACCACTTCCTGGGGAACCTGATCCCCCAATTATTTTGCACTATAATGTCAGGCTTCATGGTGATAAAATCACTGAAGATCCTGTAATTGTCCAAAACACCTGGACTTTAGCTCATGATTGGGCTGAAGAAGAGCGGTGCCCATCCCCTACTCCTGAAAAGCTCAAGAAAGTTGATGAATTGTGGCAGTGCAATAAGATCATAGGGAAGAACATTAGTCAACTTTTCGTGTCTGGCATTTATTCACATGCTTCAGGGCGATTTTCAGCATCAGAAAGAAACTCTAGAAGTAGAAAATACTTTCCTTTTAAGCGGGGTTTACCATTTGTTGCAACACTTCGAGTGGGATCAGAGGGAATTCAGATGACTATTGATGGAAAACACATATCATCATTTGCTTTCCGTGAAACGTTGGAGCCATGGCTTGTCAGTGAGATGAGAATTTCTGGGGACATCGAGTTGATTTCTGTTCTTTCCAGTGGTTTGCCCACTTCAGAAGATGCAGAACATATAATTGATCTGGAATCATTGAAATCAAGGCCTCTATCTTTGCAGGCTCCACTGGATCTCTTAATTGGTGTTTTCTCTACAGCCAACAATTTTAAGCGCAGAATGGCTGTTAGAAGAACCTGGCTGCAGTACAATGCAGTTCAATCGAATACAGCTGCTGTGCGCTTCTTTGTTGGTTTGCATAAAAGCCAAATAGTTAATGAAGAACTGTGGAAAGAAGCAGAGACCTATGGAGACGTGCAGTTGATGCCATTTGTCGACTACTACAGCCTCATCACTTGGAAAACTTTAGCAATCTGCATATTTGGGACAGAAGTTGTTTCAGCGAAGTATGTCATGAAGACAGATGATGATGCATTTGTTCGCGTGGATGAAGTGCTCACTTCTTTGAATTGGATAAATAGATCTCATGGGTTGCTTTATGGACTCATAAATTCAGATTCCAGACCTCACCGTAGTACTGATAGCAAATGGTACATCAGCCCTGAGGAATGGCCGGAAGCAACTTATCCCCCTTGGGCACATGGTCCTGGCTACGTGGTCTCACATGATATAGCAAGCACGGTGTCCCAGAAATACAGAGACGGTCATTTGAAGATGTTCAAGTTAGAAGATGTGGCAATGGGAATCTGGATTGCAGACATGAAGAAGGAAGGTCTGGACGTTCATTACGAGAACGAAGGAAGAGTATATAATGAGGGTTGCAAGGATAATTATATAGTTGCTCATTACCAGGGTCCAAGAGAGATGCTGTGTTTGTGGCAGAAACTTCAGGAAGGAAAAGGTGCAAAATGCTGTGGTAATAGAAGATGA 1935 0.4186 MIIKMNKWYGGVLMASLFMLLMLLILRYGVMKNSIGEGYLTIPVSLNGTNPLKWINPVVPPAVQNPEGSSQVISADVVVSTLFTRRNISKEEQQTLQTWNQLRHLIDHAQGLPNAAEAIKEASGAWNSLMYSVEEQRQGHANDSLNGSMREKQCPHFLNNMNLTGLGNSSYKLQFPCGLTQGSSITIIGIPNGLLGNFRIDLTGEPLPGEPDPPIILHYNVRLHGDKITEDPVIVQNTWTLAHDWAEEERCPSPTPEKLKKVDELWQCNKIIGKNISQLFVSGIYSHASGRFSASERNSRSRKYFPFKRGLPFVATLRVGSEGIQMTIDGKHISSFAFRETLEPWLVSEMRISGDIELISVLSSGLPTSEDAEHIIDLESLKSRPLSLQAPLDLLIGVFSTANNFKRRMAVRRTWLQYNAVQSNTAAVRFFVGLHKSQIVNEELWKEAETYGDVQLMPFVDYYSLITWKTLAICIFGTEVVSAKYVMKTDDDAFVRVDEVLTSLNWINRSHGLLYGLINSDSRPHRSTDSKWYISPEEWPEATYPPWAHGPGYVVSHDIASTVSQKYRDGHLKMFKLEDVAMGIWIADMKKEGLDVHYENEGRVYNEGCKDNYIVAHYQGPREMLCLWQKLQEGKGAKCCGNRR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1739 644 CDD GLECT 171 361 IPR001079 GO:0030246
Dere09g1739 644 Gene3D - 167 362 - -
Dere09g1739 644 SUPERFAMILY Concanavalin A-like lectins/glucanases 171 363 IPR013320 -
Dere09g1739 644 Pfam Galactosyltransferase 406 590 IPR002659 GO:0006486|GO:0016020|GO:0016758
Dere09g1739 644 FunFam Beta-1,3-galactosyltransferase GALT1 385 614 - -
Dere09g1739 644 Gene3D - 387 627 - -
Dere09g1739 644 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 330 597 IPR002659 GO:0006486|GO:0016020|GO:0016758
Dere09g1739 644 Pfam Galactoside-binding lectin 171 362 IPR001079 GO:0030246
Dere09g1739 644 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 171 364 IPR001079 GO:0030246
Dere09g1739 644 SMART Gal_bind_lectin_2 175 363 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1739 Dere-ChrDere09 22326968 22330581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1739 5 640 Glycosyltransferase AT1G26810 60.903 0.0 820
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g2514 03 39464098 39469418 Dere09g1739 09 22326968 22330581 CCT
Dere09g1739 09 22326968 22330581 Dere09g1739 09 22326968 22330581 ECH