Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1702 ATGTTGGACGGTCGCTCCTGCGTGGTTCCAAGGTTGTTTCCCAGCACTTGCCAGGCGGATAACAAGTGGTCTTACATGAGCTATCTGCGAGATGTCGACATTAAAAATGGCAAGTGCCCTTTTGATGTTGAAGCCAATGATATAGCCAAGCGACCGGACGAAAGCCACAAAAATAGCAAGCGCCCGTTTGAAGGTGAGGAGGTTGAATCCCAGCCGAGGAAATCTACTAAGATATTGGATTCATGCCTAACAGTTGAAACAGATGGAGTTATGGGGGAGCAGCAATCTTGTCAGGCTAAGGATTTATTGGATTCTTGTTCTGATATTAATCAAATGGATCAAAACAACTCCACCATCCAGGAGCAGAAATCTTATAAGCCTTTGAGCAGTTGCCACAGAATTGAAAATGGTGAAGCTTGTTCAAACCCACCATTTGATGGGCAAGAGCAGCATCATGCTGGGGACTCATCAAATTCTGATGACCGGCAGAAGCATGCTGGAGATGCATCTAATTTTAGTGTCCAGCAATCTGATGAGCAGCAGCAGCAACAGCAACAGCAACGGCAACATACTGGTGATTCATCAGATTCAGGTTCTCTTTTACCACGGATGAACCGTGACAGCTCAATTGCATGCCTCAGTCGCTGCTCAAGGTCTGACTATGGTTCTCTAGCCTCACTCAATAGGAGCTTTCGTAACTTAATCCAAAGTGGCGAGCTCTATACATGGAGGAGACTGAGTGGGATCATTGAACACTGGATTTATTTTTCCTGTGCCCTCCTTGAATGGGAAGCCTATGATCCAATTCGCCAACGATGGATGCATTTACCGAGGATGGCTTCCAATGAATGCTTTATGTGTTCAGACAAAGAGTCTCTGGCTGTAGGTACTGAACTTCTTGTATTTGGTAGGGAGATGACCTCGCATGTCATTTATAGATATAGTCTTTTGACAAACTCATGGACATCTGGGATGAGGATGAACGCACCTAGATGCTTGTTTGGGTCTGCTAGCCTTGGAGAGATTGCAATTTTAGCAGGTGGATGTGATTCGGAGGGGCGTATTCTTAGCTCAGCTGAACTATATAATTCTGAGACTCAAGCCTGGGAATTGCTCCCAAGCATGAATAAACCCAGGAAAATGTGTTCTGGGGTTTTTATGGACGGAAAGTTTTATGTTATTGGGGGAATTGGAGGAAGTGATTCCAAGCTTCTTATGTGTGGTGAGGAGTACAATTTACAGACTAGAACATGGACAGAAATTCCTAACATGTCCCCTGGACGTAGTAGTAGGGGAGTCGAGATGCCTGCAACAGCTGAGGCACCTCCTCTTGTTGCTGTTGTAAATGATGAACTGTATGCTGCCAATTATGCTGACATGGAGGTAAAGAAATATGACAAAGAAGGAAGAGTGTGGGTTACCATTGGGAGACTGCCTGAACGAGTAGTGTCAATGAATGGTTGGGGTCTTGCATTCAGGGCTTGTGGAAACCGGCTTATTGTTATTGGTGGACCTAGGACTCATGGTGAGGGTTTTATTGAACTCAACTCGTGGGTGCCCAGTGAAGGTCCTCCAGATTGGAATCTACTTGCCAGAAAACGGTCTGGTAACTTTGTCTATAATTGTGCTGTGATGGGATGCTGA 1644 0.4532 MLDGRSCVVPRLFPSTCQADNKWSYMSYLRDVDIKNGKCPFDVEANDIAKRPDESHKNSKRPFEGEEVESQPRKSTKILDSCLTVETDGVMGEQQSCQAKDLLDSCSDINQMDQNNSTIQEQKSYKPLSSCHRIENGEACSNPPFDGQEQHHAGDSSNSDDRQKHAGDASNFSVQQSDEQQQQQQQQRQHTGDSSDSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNLIQSGELYTWRRLSGIIEHWIYFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAVGTELLVFGREMTSHVIYRYSLLTNSWTSGMRMNAPRCLFGSASLGEIAILAGGCDSEGRILSSAELYNSETQAWELLPSMNKPRKMCSGVFMDGKFYVIGGIGGSDSKLLMCGEEYNLQTRTWTEIPNMSPGRSSRGVEMPATAEAPPLVAVVNDELYAANYADMEVKKYDKEGRVWVTIGRLPERVVSMNGWGLAFRACGNRLIVIGGPRTHGEGFIELNSWVPSEGPPDWNLLARKRSGNFVYNCAVMGC 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1702 547 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 189 547 - -
Dere09g1702 547 SMART kelc_smart 342 389 IPR006652 GO:0005515
Dere09g1702 547 SMART kelc_smart 298 341 IPR006652 GO:0005515
Dere09g1702 547 SMART kelc_smart 390 438 IPR006652 GO:0005515
Dere09g1702 547 MobiDBLite consensus disorder prediction 50 74 - -
Dere09g1702 547 MobiDBLite consensus disorder prediction 134 202 - -
Dere09g1702 547 SUPERFAMILY Kelch motif 260 527 IPR015915 GO:0005515
Dere09g1702 547 MobiDBLite consensus disorder prediction 153 167 - -
Dere09g1702 547 Pfam Kelch motif 330 376 IPR006652 GO:0005515
Dere09g1702 547 Pfam Kelch motif 378 425 IPR006652 GO:0005515
Dere09g1702 547 FunFam F-box/kelch-repeat protein SKIP11 246 532 - -
Dere09g1702 547 Gene3D - 247 524 IPR015915 GO:0005515
Dere09g1702 547 MobiDBLite consensus disorder prediction 168 202 - -
Dere09g1702 547 MobiDBLite consensus disorder prediction 50 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1702 Dere-ChrDere09 21923436 21925079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1702 207 423 EF-hand Containing Proteins AT4G39560 27.523 1.76e-07 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1702 09 21923436 21925079 Dere09g1702 09 21923436 21925079 ECH