Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1647 ATGGACCCCACCCCATTTGTGACCCCGAGAGGATCTGTTTCAACGAGTATAGGCGACTCTGCGGAGCTCGAAGCCAATCTCACACTCAGCGACAAGCTAAAGATATTCAAGAGTTCCTCCTTTGATCCCAATGACTATGTCACCACCAAATCTCGTAGCATGAACGAAAAGGATATAAAACATGTGTGCAATTACCTTGTTGACTTGAAGAGGGCTTCAGCAGAAGAAATGCGCAAAAGTGTTCTTGCTAATTATTCAGCCTTCATACGTACTTCTAAAGAGATCTCAGATCTCGAGGGGGAGCTGCTTTCCATGAGAAATCTCCTATCCACCCAGGCTGCTTTGGTTCATGGTTTAGCAGACAGAAGCCGGCTTGGTTCTTTTATCGCTGAACCTGAAGATTCTGATTCAGAGGACATGCTAGATGAAAAAGCAGACCAATCCAAGACAGAGAATTGGCTTACAGGATATCTTGAGAAGCTTGAAGTCCTATTAGCCGAGAAAAGAATAGATGAAGCCATGGCTTCCTTACAAGAAGGAGAAGCCATGGCAGAAGAAATTAGAGACAGAAAAGCTTTAAGTCCAAGTACATTACTCGTATTACAAGCAGCCATTACAGAACACAGAACTAAACTAGCTGATCAGCTTGCAGAAACTATATGCCAGCCTTCAACTGGTAGCTCTGAGCTTCGCTCATCAACTCTAGCTTTAAAAAAGCTAGGAGATGGTCCTCGTGCACACACATTACTCCTAAATTCTCACCATGAGAAGTTGCAACGCAGCATGCATAGTCTTAGGTCCGTCTCATACAGTGGAGGAGCATACACTGCTAAACTCTCCAAGCTTGTATTTTCTACCATTTCACAAGCAGTGAATGATTCATTGACAGTGTTTGGTGAAGAAGAGCCTGCATATACTTCTGAATTAGTGACTTGGGCTGTAAAGCAGGCGGACACTCTTGTCTCCCTCCTCAAGAAACATGTTCTGTCCTCTACAGCATCTGCTGGGGGCTTGAGAGTTTCTTCTGAATGTGTTCGTGTTTGCTTGAGTCACTGTTATATCTTAGAGGCTCGTGGGTTAGCACTTTCTCCTGTGTTGTTGAAACAATTCAGGCCCTTTGTTGAGAATGCACTGAACACAAACTTGAAAAGAATTGAACAAAGTAGTGCTGCTAGCGCTGCTGTGGATGACTGGTTACTTATTTATTCACCTACCAGCAGGTTTTCAGGGTTACATTCGGCTGCTTCTTTTAGTAATGTATCCCAGGCGCCCAAGCTTTCAAGCAGTGCTCATAAGTTCAACTCAATGATTCAGGAGTTTTTTGAGGATGTTGGGCCTCTAGAATTCCTAGAGTTGGATAATCTGGCATATGAAGGTCTTATATCACTGTTCAACTCCTATGTCAATCTCTTAATAAATGCACTGCCAGGTTCAGTGGAAACTGAGAACCTAGAAGGCTCAGGGCCAAAAATTGTTAGGGTAGCCGAGACAGAAGCGCAACAGGTGGCATTGCTGGCAAATGCATTGTTGCTAGCTGATGAGTTGATCCCACGTGCTGTCGTGAAGGTTTTTCAGAGCACCAAAAGTGATGAATCTCAGAAAAGAGCAGGACCAGAGAAGAATCAGAAGGCTCCTGAGCAGAGGGAGCTGAAGAAAAGGCTTCAGCGTGAAGTTGATCGCCTAAGAGATAGCTTCTGCAGGCAACATGCTCTTGAACTCATCTTCACAGAAGATGGGAACACACGTTTGAATGCATTGATGTATTTGAGTATGGATGGGCATACAGAGGAGCCCGAGTGGTTTCCGTCTCCAATTTTTCAGGAGTTTTTTTTAAAACTTAGCCGAATGGCAAGCATTGCTACAGATATGTTTGTGGGAAGGGAAAGGTTTGCTACCATTTTACTAATGAGAATGTCGGAAACAGTGATTCTTTGGCTTTCTGAAGATCAGGCATTCTGGGAGGAGATAGAGGCTGGCCAAGTGCCTTTGGGTGCTTTTGGCCTTCGACAGCTTTATTTGGATATGCAGTTTGTGATAATATTTGCATCCCAAGGCCGTTATTTATCTCGTCAGCTTCATCAAGTTATTAAAAACATTATTGGTAGGGCAATTGAGGCTGTTGCTGCTACTGGGCTTGACCCCAATAGTATCTTGCCAGAGGATGAATGGTTTGTTGAAGTTTCTCAAATAGCTCTAGAGATTTTAACTGGGAAAACCACATTTGGCAGTGTAGAGAAAGATGCTACCAGCCCAACTGCTTCTGTTTCAGGAAGGTCAATTTCATCAGTCCATTCTCATGGAAGTAACTAA 2310 0.4372 MDPTPFVTPRGSVSTSIGDSAELEANLTLSDKLKIFKSSSFDPNDYVTTKSRSMNEKDIKHVCNYLVDLKRASAEEMRKSVLANYSAFIRTSKEISDLEGELLSMRNLLSTQAALVHGLADRSRLGSFIAEPEDSDSEDMLDEKADQSKTENWLTGYLEKLEVLLAEKRIDEAMASLQEGEAMAEEIRDRKALSPSTLLVLQAAITEHRTKLADQLAETICQPSTGSSELRSSTLALKKLGDGPRAHTLLLNSHHEKLQRSMHSLRSVSYSGGAYTAKLSKLVFSTISQAVNDSLTVFGEEEPAYTSELVTWAVKQADTLVSLLKKHVLSSTASAGGLRVSSECVRVCLSHCYILEARGLALSPVLLKQFRPFVENALNTNLKRIEQSSAASAAVDDWLLIYSPTSRFSGLHSAASFSNVSQAPKLSSSAHKFNSMIQEFFEDVGPLEFLELDNLAYEGLISLFNSYVNLLINALPGSVETENLEGSGPKIVRVAETEAQQVALLANALLLADELIPRAVVKVFQSTKSDESQKRAGPEKNQKAPEQRELKKRLQREVDRLRDSFCRQHALELIFTEDGNTRLNALMYLSMDGHTEEPEWFPSPIFQEFFLKLSRMASIATDMFVGRERFATILLMRMSETVILWLSEDQAFWEEIEAGQVPLGAFGLRQLYLDMQFVIIFASQGRYLSRQLHQVIKNIIGRAIEAVAATGLDPNSILPEDEWFVEVSQIALEILTGKTTFGSVEKDATSPTASVSGRSISSVHSHGSN 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1647 769 MobiDBLite consensus disorder prediction 530 550 - -
Dere09g1647 769 PANTHER EXOCYST COMPLEX COMPONENT 8 18 762 IPR033961 GO:0000145|GO:0006887
Dere09g1647 769 Coils Coil 170 190 - -
Dere09g1647 769 Coils Coil 544 564 - -
Dere09g1647 769 Gene3D - 272 376 IPR042560 -
Dere09g1647 769 Pfam Exocyst component 84 C-terminal 153 362 IPR032403 -
Dere09g1647 769 SUPERFAMILY Cullin repeat-like 145 378 IPR016159 -
Dere09g1647 769 Gene3D - 142 263 IPR042561 -
Dere09g1647 769 MobiDBLite consensus disorder prediction 745 769 - -
Dere09g1647 769 Pfam Vps51/Vps67 36 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1647 Dere-ChrDere09 21097615 21104384 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1647 09 21097615 21104384 Dere09g1647 09 21097615 21104384 ECH