Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1586 ATGAATCCCTTCTCTTCAGGGACGCGCTTGAGGGATATGATTCGGGCCATACGTGCTTGCAAAACAGCAGCAGAAGAACGTGCTGTTGTAAGAAAAGAGTGTGCTGCTATTCGTGCTGCGATTAATGAGAATGATCAAGATTATAGACATCGGAATCTGGCTAAGCTAATGTTCATACACATGCTTGGCTACCCAACACATTTTGGTCAAATGGAATGCCTCAAGTTGATTGCATCTCCTGGATTCCCAGAGAAGAGAATAGGTTACCTTGGCCTCATGTTGCTTCTTGATGAAAGACAAGAGGTTCTAATGTTGGTCACGAACTCTTTGAAACAAGATCTCAATCACACAAATCAGTATATAGTTGGACTTGCTCTTTGTGCTTTGGGAAACATTTGTTCAGCAGAAATGGCTCGTGATCTTGCACCAGAGGTTGAGAGATTGCTGCAATTTCGAGATCCAAATGTCCGGAAAAAGGCAGCATTATGCACTATAAGGATCATAAAGAAAGTTCCAGACCTGGCAGAAAACTTTATTAATTCTGCTGCTGCATTACTTAAGGAGAAGCATCATGGAGTTTTGATCACTGGTGTTCAGCTTTGTACAGAACTGTGTAAAGTTAGTCTAGAAGCCCTTGAATACTTTAGAAAGAATTGCACAAAGGGTTTGGTCAGAACTCTAAAGGATCTAGTTAATAGTCCTTATGCACCAGAGTATGACATTGCTGGTATCACAGATCCTTTCCTCCATATTAGATTGCTTAAGCTTTTGCGAGTGCTGGGTGAAGGTGATGCTGATGCTAGTGACTCTATGAATGACATACTTGCACAGGTGGCTACCAAGACTGAGTCAAATAAAGTTGCAGGGAATGCCATTTTATATGAGTGTGTTCAAACAATCATGAGTGTAGAAGATAGTGGTGGCTTACGTGTGCTTGCCATCAATATCCTCGGTAGATTCTTATCGAACCGTGACAACAATATAAGGTATGTGGCATTAAACATGCTGATGAAGGCTGTAACAGCTGATGCTCAGGCAGTGCAGAGGCATAGGGAAACTATTCTGGAATGTGTAAAGGATTCTGATGCATCAATTCAGAAAAGAGCTCTTGAACTTGTGTACGCTCTGGTGAATGAAAGTAATGTGAAGCCCTTAACGAAAGAGCTGATTGATTATCTGGAAGTCAGTGATCAAGAATTCAGGGCTGACCTTACTGCCAAAATTTGCTCTATAGTTGCCAAGTTTTCCCCAGAGAAGATCTGGTATGTTGATCAGATGCTCAAGGTCCTTTCTGAGGCTGGAAATTTTGTAAAAGATGAAGTATGGCATGCTGTAATTGTTGTGATAAGCAATGCTTATGACCTTCATGGATATACAGTAAGAGCATTATACAGAGCATTGCAAACTTCAGCTGAACAGGAAAGTCTTGTTCGAGTTGCAGTGTGGTGCATTGGAGAATATGGTGACATTTTAGTCAAGAATGTTGGAATGCTTGACATAGAAGATCCAATAACGGTGACTGAGTCAGATGCTGTGGATGTTGTAGAGATGGCTATAAAACGCCATGCATCAGATCTTACCACAAAAGCAATGGCTTTGGTTGCCCTGTTGAAAATCTCTTCACGTTTTCCATCTTGTTCAGAGAGGATCAGGAATATAATCATTCAGTATAAAGGGAACCTTGTGCTTGAATTGCAGCAAAGATCTATAGAATTTGATAAAATTCTTGCAAATCATCAAAATATTAGGTCTACACTTGTAGAAAGGATGCCAGTTTTAGATGAGGCAACTTTCATTGGAAGGAAAGCTGGTTCTATGCCAGGCACAGCTTCAACTCCAACGGGACCTTCAGTTAATCTTCCAAATGGAATCGCCAAACCTTCTGTGGCTCCTCTTGTAGATCTGCTTGATTTAGATTCAGATGATGCTCCTGCACCTAGCTCTTCTGGTGGTGATATTCTTCAGGACCTTCTTGGCGTTGACTTACCATCAGCTTCACAACAGTTTGGTTCTGGTCAAGCTCCCAAAAGTGGTACAGATGTTCTTTTGGATCTTTTGTCTATTGGATCACCTTCGGCTCCTACAACATCACCTTCTGCACAAAGCTTCTCATCTACAATAGACATCTTATCATCCAGTACGAATAATAAAACACCAGTTTCACCACTGGATGATCTATCATCTCTTTCACTTTCTGCGAGAGCAACTTCTAATGCTGGAGCTGCTCCTATGATGGATTTGTTGGACGGTTTGGCCCCTAGCCCTCCAATAGAAAACAATGGACCAGTTTATCCATCTATAACAGCTTTTGAGAGCAGCTCCTTGAGGGTGACATTTAATTTCTCCAAAGAACCAGGAAACCCACAAACAACAATTATTCAAGCTACCTTTGCAAATTTGACATCTAATACATATACAGATTTTGTTTTCCAGGCAGCAGTTCCAAAGTTTCTTCAATTGCACTTAGATCCAGCTAGTGGCAATGCTCTGCCTGCTAGTGGTGATGGAGCCATCACACAAAATTTGAGAGTAACTAATACCCAACATGGAAAGAAATCTCTTATCATGCGTACAAGGATAGCATACAAGATAAATGGCAAGGATACACTGGAAGAAGGACAAATCAATAATTTTCCTCGTGATTTATGA 2649 0.4103 MNPFSSGTRLRDMIRAIRACKTAAEERAVVRKECAAIRAAINENDQDYRHRNLAKLMFIHMLGYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNICSAEMARDLAPEVERLLQFRDPNVRKKAALCTIRIIKKVPDLAENFINSAAALLKEKHHGVLITGVQLCTELCKVSLEALEYFRKNCTKGLVRTLKDLVNSPYAPEYDIAGITDPFLHIRLLKLLRVLGEGDADASDSMNDILAQVATKTESNKVAGNAILYECVQTIMSVEDSGGLRVLAINILGRFLSNRDNNIRYVALNMLMKAVTADAQAVQRHRETILECVKDSDASIQKRALELVYALVNESNVKPLTKELIDYLEVSDQEFRADLTAKICSIVAKFSPEKIWYVDQMLKVLSEAGNFVKDEVWHAVIVVISNAYDLHGYTVRALYRALQTSAEQESLVRVAVWCIGEYGDILVKNVGMLDIEDPITVTESDAVDVVEMAIKRHASDLTTKAMALVALLKISSRFPSCSERIRNIIIQYKGNLVLELQQRSIEFDKILANHQNIRSTLVERMPVLDEATFIGRKAGSMPGTASTPTGPSVNLPNGIAKPSVAPLVDLLDLDSDDAPAPSSSGGDILQDLLGVDLPSASQQFGSGQAPKSGTDVLLDLLSIGSPSAPTTSPSAQSFSSTIDILSSSTNNKTPVSPLDDLSSLSLSARATSNAGAAPMMDLLDGLAPSPPIENNGPVYPSITAFESSSLRVTFNFSKEPGNPQTTIIQATFANLTSNTYTDFVFQAAVPKFLQLHLDPASGNALPASGDGAITQNLRVTNTQHGKKSLIMRTRIAYKINGKDTLEEGQINNFPRDL 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1586 882 PIRSF AP1_gamma 6 882 IPR017107 GO:0005794|GO:0016192|GO:0030121
Dere09g1586 882 Gene3D - 2 594 IPR011989 -
Dere09g1586 882 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 11 870 - -
Dere09g1586 882 Gene3D - 746 881 - -
Dere09g1586 882 Pfam Adaptin N terminal region 27 578 IPR002553 GO:0006886|GO:0016192|GO:0030117
Dere09g1586 882 Pfam Adaptin C-terminal domain 765 879 IPR008152 GO:0006886|GO:0016192
Dere09g1586 882 SUPERFAMILY Clathrin adaptor appendage domain 741 881 IPR013041 -
Dere09g1586 882 FunFam AP-1 complex subunit gamma 752 882 - -
Dere09g1586 882 ProSiteProfiles Gamma-adaptin ear (GAE) domain profile. 762 879 IPR008153 -
Dere09g1586 882 FunFam AP-1 complex subunit gamma 2 594 - -
Dere09g1586 882 SUPERFAMILY ARM repeat 25 593 IPR016024 -
Dere09g1586 882 SMART alpha_adaptinc2 759 879 IPR008152 GO:0006886|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1586 Dere-ChrDere09 20176424 20195311 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1586 09 20176424 20195311 Dere09g1586 09 20176424 20195311 ECH