Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1565 ATGCTTCTGTGTTGCACCGGCAAGGTTGCTTCGAAGGACATCATGGCTTCGGGAGAGTCGTACGAGGAAGCCATTGCAGGGTTGACCAAGCTTCTCAGTAAGAAAGCTGACCTGGGAGGAGCCGCCGCCACGAAGATCAAGCAGTTAACGGCGGAGCTAGAGGCAGCCGGCGAGAAGCCGTTTAACCCGGACCAGAGGATCAAAGCCGGGTTCAGTCATTTCAAGACAGAAAAATTCGAGAAGAATCCTGATTTATATGGCGAACTTGCCAAAGGCCAAAGTCCAAAGTTTATGGTGTTTGCATGCTCAGACTCAAGAGTATGCCCATCCCATGTTCTGGATTTCCAGCCTGGTGAAGCCTTCGTGGTCAGAAACATCGCCAATATGGTTCCACCTTATGACAAGACAAAGTTTGCAGGAGCAGGAGCAGCCATTGAATACGCAGTCTTACACTTAAAGGTGGAGAATATTGTGGTGATCGGACATAGCTGTTGTGGTGGTATAAAGGGGCTCATGTCTATCCCAGATGATGGGACCACTGCTTCTGAATTCATAGAGCATTGGGTCCAGATTTGTAATCCAGCAAAGTCCAGAGTTAAAACAGACACAAGCAGCTTGAGTTTCTCTGAACAGTGCGCCAACTGTGAGAAGGAAGCTGTGAATGTATCGCTAGGGAACCTATTGACTTATCCATTTGTGAGAGATGGGGTGGTGAAGAAGACGCTGGCTTTGAAGGGAGCACATTATGATTTTGTGAATGGCACTTTTGAGCTGTGGGATTTGGACTTCAAAATTACTTCATCTGTAGTGTGTGTGTGA 819 0.4762 MLLCCTGKVASKDIMASGESYEEAIAGLTKLLSKKADLGGAAATKIKQLTAELEAAGEKPFNPDQRIKAGFSHFKTEKFEKNPDLYGELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNIANMVPPYDKTKFAGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASEFIEHWVQICNPAKSRVKTDTSSLSFSEQCANCEKEAVNVSLGNLLTYPFVRDGVVKKTLALKGAHYDFVNGTFELWDLDFKITSSVVCV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1565 272 SMART Pro_CA_2 90 260 IPR001765 GO:0004089|GO:0008270
Dere09g1565 272 Pfam Carbonic anhydrase 98 255 IPR001765 GO:0004089|GO:0008270
Dere09g1565 272 FunFam Carbonic anhydrase 52 271 - -
Dere09g1565 272 CDD beta_CA_cladeB 70 259 IPR045066 GO:0004089|GO:0008270
Dere09g1565 272 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 102 109 IPR015892 GO:0004089|GO:0008270|GO:0015976
Dere09g1565 272 PANTHER CARBONIC ANHYDRASE 51 263 IPR001765 GO:0004089|GO:0008270
Dere09g1565 272 Gene3D Carbonic anhydrase 57 271 IPR036874 GO:0004089|GO:0008270
Dere09g1565 272 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 146 166 IPR015892 GO:0004089|GO:0008270|GO:0015976
Dere09g1565 272 SUPERFAMILY beta-carbonic anhydrase, cab 65 265 IPR036874 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1565 Dere-ChrDere09 19940212 19949629 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1565 09 19940212 19949629 Dere13g1191 13 16493303 16498432 CCT
Dere09g1565 09 19940212 19949629 Dere09g1565 09 19940212 19949629 ECH