Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1564 ATGAAGTCTGGGAGGCTAGTAGGAGGAATTACGTGCAAGGATTCTGTTGAAGAACAGGATGTTAGTGACCTCAAGGTTAGAAGGTGTGATGCAGCAGAAAGCAGAGATCAAAGCAAAATGACCACTGATGAAAAAGCAACTGGGATTTCATCTTTCAGAATTGTGGATTCAAGTAGTAGTCGATGCCCGCTGGAATTTCGTTATCCAGTTTCTATTATGCAAGCCAACAAATACTCCTTAATTTATAAAGTTACTCAGTCTTCACCTTCTCCTGTACTTTCCTTTGTGGAGAAAGTGCCTCGAGGTACACAAACTTCTCATATAACAGCTGTTGATTCAGAACACAGATACCCAAAGTCAGAAAACGGGTCATCTTCATCTAAGACCATAAGGGATGTACATATTTCAATGGGGCTAATGGAGGACTTTCTTGAGCTTGCTAGAGAAAATACTGAAAAGGATCTGGAAACATGTGGTATACTTGGTGCCTTGCTTGAGAAGGGAACCCTCTACATGACCACTCTGATCATACCAAAACAGGAATCAACTTCCAATTCTTGTCAGGCTACGAACGAGGAGGAAGTTTTTGCAATTCTAAATGAAAGATCCCTTTTTCCTGTGGGATGGATTCATACTCATCCTTCTCAAAATTGTTTCATGTCATCAGTGGATCTGCACACTCAATTTTCGTATCAGGTAATGGTTCCTGAGGCTTTTGCCATTGTCCTGGCTCCTAATGATACCTCAAGGAGCTTCGGATTCTTTCGAATAACTGACCCTGATGGAATGGGTGTTCTCAAAGGTTGCCAAGAGAAGGGGTTTCATTTGCACAAGGAACCAGATGATGGGAGTCCCATGTATGAGCACTGCTCCAATGTGTACAAAAACTACAATATTAGGTTCGAAATCTTTGATTTGCGCTGA 924 0.4167 MKSGRLVGGITCKDSVEEQDVSDLKVRRCDAAESRDQSKMTTDEKATGISSFRIVDSSSSRCPLEFRYPVSIMQANKYSLIYKVTQSSPSPVLSFVEKVPRGTQTSHITAVDSEHRYPKSENGSSSSKTIRDVHISMGLMEDFLELARENTEKDLETCGILGALLEKGTLYMTTLIIPKQESTSNSCQATNEEEVFAILNERSLFPVGWIHTHPSQNCFMSSVDLHTQFSYQVMVPEAFAIVLAPNDTSRSFGFFRITDPDGMGVLKGCQEKGFHLHKEPDDGSPMYEHCSNVYKNYNIRFEIFDLR 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1564 307 Gene3D Cytidine Deaminase, domain 2 110 307 - -
Dere09g1564 307 SMART pad1_6 132 260 IPR000555 GO:0005515|GO:0008233|GO:0008237
Dere09g1564 307 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 130 236 IPR000555 GO:0005515|GO:0008233|GO:0008237
Dere09g1564 307 CDD MPN_AMSH_like 130 307 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Dere09g1564 307 MobiDBLite consensus disorder prediction 106 128 - -
Dere09g1564 307 PANTHER AMSH-LIKE PROTEASE 27 307 - -
Dere09g1564 307 ProSiteProfiles MPN domain profile. 133 263 IPR037518 -
Dere09g1564 307 SUPERFAMILY JAB1/MPN domain 133 261 - -
Dere09g1564 307 FunFam AMSH-like ubiquitin thioesterase 2 112 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1564 Dere-ChrDere09 19933786 19937539 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1564 09 19933786 19937539 Dere09g1564 09 19933786 19937539 ECH