Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1543 ATGGCTTCATCTTCAAAATTGGTCGTGAAACCTGACATGTTATTTGGAAAGCGTGGTAAAAGCGGTCTGGTTGCCTTGAATCTACATTTGGCACAAGTTGCTTCTTTTGTGAAAGAGCATCTTGGCAAAGAGGTTGAGATAAGTGAATGCAAAGGACCAATAACAACTTTCATTGTTGAACCTTTCATCCCTCACAATGAAGAGTTCTACCTTAACAATGTCTCTGAGAGACTTGGGAACAGTATAAGCTTTTCAGAATGTGGAGGAATTGAAATTGAAGAGAACTGGGATAAGGTTAAGACTGTATTCGTTCCAACAGGAGCGTCTCTTGCATCAGACACCATTGCCCCACTTATTGCAATCCTTCCCTTGGGGATTAAGGGAGAAATCGAGGTGTTCCTCAAGGTGATTTTCACTCTATTTCAAGACCTGGATTTCACTTTCCTTGAGATGAACCCTTTTACATTGGTCAATGGAAAGCCTTATCCTTTGGATATGAGAGGCCAGCTTGATGACACCGCTACTTTCAAGAACTTCAAAAAATGGGGGAACGTCGAATTTCCATTGCCATTTGGAAGGGTTATGGGTCCCGCAGAGAGTCACATTTGTGGATTAGATATGAAGGTTGCAGATCTTGGCTACGCTTCTGAGCTTGGAAACTACGCAGAATACGGTGGAGCACCCAATGAAGAGGAGGTCTTGCAGTATGCCAGAGTTGTACTTGACTGTGCAACTGCAAACCCTGATGGCCGAAAGAGAGCTCTTCTGGTTGGAGGAGGAATAGCAAACTTCACCGATATTGGTGCTACATTTAGCGGCATAATTCGAGCACTCAAGGAGAAGGCAAAGCTAAAAGCAGCAAGGATGCACATATACGCTAGAAGAGGAGGTCCCAACTATCAGATGGGTTTGGCTAAAATGCGAGCACTTGGAGAGGAGATCGGCATCCCTATTGAGGTTTATGGACCAGAAGAAACAATGACTAGCATATGCAATCGGGCAATTCAATGCATCACTGCAGCAGCTTAA 1029 0.4402 MASSSKLVVKPDMLFGKRGKSGLVALNLHLAQVASFVKEHLGKEVEISECKGPITTFIVEPFIPHNEEFYLNNVSERLGNSISFSECGGIEIEENWDKVKTVFVPTGASLASDTIAPLIAILPLGIKGEIEVFLKVIFTLFQDLDFTFLEMNPFTLVNGKPYPLDMRGQLDDTATFKNFKKWGNVEFPLPFGRVMGPAESHICGLDMKVADLGYASELGNYAEYGGAPNEEEVLQYARVVLDCATANPDGRKRALLVGGGIANFTDIGATFSGIIRALKEKAKLKAARMHIYARRGGPNYQMGLAKMRALGEEIGIPIEVYGPEETMTSICNRAIQCITAAA 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1543 342 FunFam ATP-citrate synthase alpha chain protein 194 341 - -
Dere09g1543 342 FunFam ATP-citrate synthase alpha chain protein 1 185 - -
Dere09g1543 342 Pfam ATP-grasp domain 4 155 IPR013650 -
Dere09g1543 342 SUPERFAMILY Succinyl-CoA synthetase domains 217 326 IPR016102 -
Dere09g1543 342 Gene3D - 203 341 IPR016102 -
Dere09g1543 342 Gene3D - 1 185 - -
Dere09g1543 342 Pfam ATP citrate lyase citrate-binding 209 336 IPR032263 -
Dere09g1543 342 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 6 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1543 Dere-ChrDere09 19806718 19810716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1543 3 342 Acyl Lipid Metabolism Gene Families AT1G10670 74.799 0.0 563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1543 09 19806718 19810716 Dere09g1543 09 19806718 19810716 ECH