Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1390 ATGGCACTGAGCAACAACGTGATCGGAGCCATCAATTTCGTGGCCGTACTACTCTCGATCCCAATCATCGGCGCCGGAATCTGGCTAACAAACGAGCCGGCAAATTCGTGCGTGAAGACTCTACAATGGCCGGTCATAATACTGGGAGTTCTGATATTGGTGGTGGCTCTTGCGGGCCTCATTGGAGGGTTCTGGAGAATCTCATGGCTCCTCATATTCTACATGGTGGCCATGCTTGTGCTCATCATACTGCTGGTGTGCTTGGTGGTGTTCGTGTACATGGTCACTCTCAGAGGCCACGGCGACATTGAACCGAACCGAAGTTACTTGGAGTACCATCTCGACGACTTCTCCGGCTGGCTCCGTCGAAGGGTCAGGAGTTCCTATAAATGGGATCGCATCAGAAGTTGCCTGAGCTCCACCAATATGTGTGCTGAGTTGAACCAGAATTTTCGCATGGCTCAGGACTTCTTTAACGCACATCTAACACCCATGCAGTCAGGATGCTGTAAGCCACCGACGCTATGTGGGTACACGTTTGTGAATCCAACATATTGGATTAGCCCCATCAATAATGGAGCCGATATGGACTGTCTTCAATGGAGCAACGACCAGACACAACTATGCTACGCCTGCGACTCGTGCAAAGCTGGGTTATTAGCAAACCTCAGGAAGGAGTGGAGGAGGGCCAACGTCATATTGATCATCACTGTCATTGCTTTGATTTTAATTTATTTGATAGGGTGTTGTGCCTTCAGGAATGCCAAAACTGACGAGATCTTTCGCAAATACAAGCAGGGCTATACTTGA 810 0.4926 MALSNNVIGAINFVAVLLSIPIIGAGIWLTNEPANSCVKTLQWPVIILGVLILVVALAGLIGGFWRISWLLIFYMVAMLVLIILLVCLVVFVYMVTLRGHGDIEPNRSYLEYHLDDFSGWLRRRVRSSYKWDRIRSCLSSTNMCAELNQNFRMAQDFFNAHLTPMQSGCCKPPTLCGYTFVNPTYWISPINNGADMDCLQWSNDQTQLCYACDSCKAGLLANLRKEWRRANVILIITVIALILIYLIGCCAFRNAKTDEIFRKYKQGYT 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1390 269 Pfam Tetraspanin family 6 251 IPR018499 GO:0016020
Dere09g1390 269 PRINTS Transmembrane four family signature 38 64 - -
Dere09g1390 269 PRINTS Transmembrane four family signature 65 93 - -
Dere09g1390 269 PRINTS Transmembrane four family signature 6 29 - -
Dere09g1390 269 PANTHER TETRASPANIN-8-RELATED 1 258 IPR044991 GO:0009734|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1390 Dere-ChrDere09 17961216 17962676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1390 1 269 Miscellaneous Gene Families AT5G46700 72.119 5.81e-139 390
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1390 09 17961216 17962676 Dere09g1390 09 17961216 17962676 ECH