Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1366 ATGAAGATGATGATGATGGATACTGATGCGTTTTCCGTGTCCAACATGAGGAAGGAGGAACTCATACGTATGGGTTCCAAATGAGATAACCGTTCTCCCTCGCCGATAGCTGAGTTTCGTGGTGGTTTTCTCGCACCAGAGATTTCTATTTGTGATCGCTTTGCGATCATTATTGCTTATGCACGAGTGGGTTTTCCCAAGGTTCTAGTTCTTATGTATACATATCTGCCTTTTTTTTGTCAGATAAAAACTGTTAAAGTCAGTAATGTTTCCTTGGGGGCAACTGAGCAAGACATTAAGGAGTTCTTTGCTTTTTCTGGTGATATTGAATATGTTGAACTGAGGAGTCACGATGAGAGGTCTCAAATTGCCTATGTCACCTTCAAGGATTCACAAGGAGCTGAGACTGCAGTCCTACTATCGGGAGCAACAATAGTTGATCTGTCAGTTACAATTACTCTTGATCCTGATTACCAGCTTCCACCTGCTGCTTTGGCATCATCTGCAACAGAAAGTAAAACTCCTGGTGGTGCTGAATCTGCTTTAAGAAAGGCAGAGGATGTGGTTACCAGCATGCTGGCCAAGGGCTTTGTCTTGGGGAAAGATGCTGTTGGCAAAGCAAAGACTTTTGATGAGAAGCACCAGTTATCTTCAACAGCCTCAGCAAAGGTTGCATCTTTTGACCAAAAAATTGGTCTTAGTGAGAAAATAACTGCTGGTGCTTCGGTTGTGAGTGACCGAGTTCGAGAAGTGGATCAAAAGTTTCAGGTTTCAGAGAAAACCAAGACGGCATTTGCAGCTGCAGAACAGAAAGTCAGTGATGCTGGTTCTGCTATCATGAAAAATCGCTATATACTCACTGGGGCTTCATGGGTAACAGGTGCTTTCAGTAAGGTTGCTAAGGCAGCTGGGGAAGTGGGACAGAAGACAAAGGAGAAAGTGGACAATGCAGAAGAGGAAAAGAAGGGAAAGGATCAGTATGCCCACGTTCAATCTGAGTCTCCCAAAGCAGCAGCAACAGGTCCGCAGCAACAGATGCTTTGA 1044 0.4425 MKMMMMDTDAFSVSNMRKEELIRMGSKXDNRSPSPIAEFRGGFLAPEISICDRFAIIIAYARVGFPKVLVLMYTYLPFFCQIKTVKVSNVSLGATEQDIKEFFAFSGDIEYVELRSHDERSQIAYVTFKDSQGAETAVLLSGATIVDLSVTITLDPDYQLPPAALASSATESKTPGGAESALRKAEDVVTSMLAKGFVLGKDAVGKAKTFDEKHQLSSTASAKVASFDQKIGLSEKITAGASVVSDRVREVDQKFQVSEKTKTAFAAAEQKVSDAGSAIMKNRYILTGASWVTGAFSKVAKAAGEVGQKTKEKVDNAEEEKKGKDQYAHVQSESPKAAATGPQQQML 347
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1366 347 SUPERFAMILY RNA-binding domain, RBD 82 155 IPR035979 GO:0003676
Dere09g1366 347 Gene3D - 81 153 IPR012677 -
Dere09g1366 347 MobiDBLite consensus disorder prediction 311 347 - -
Dere09g1366 347 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 83 321 - -
Dere09g1366 347 FunFam RNA recognition motif-containing protein 79 153 - -
Dere09g1366 347 SMART rrm1_1 84 153 IPR000504 GO:0003723
Dere09g1366 347 MobiDBLite consensus disorder prediction 311 329 - -
Dere09g1366 347 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 83 157 IPR000504 GO:0003723
Dere09g1366 347 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 86 145 IPR000504 GO:0003723
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere09g1366 Dere-ChrDere09 17721364 17725687 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1366 09 17721364 17725687 Dere09g1366 09 17721364 17725687 ECH