Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1352 ATGGAAACAAATATCGCAAAGGCATTGGATAGAGCTGTGCTCAATTTGAAAAGAAAGCGGGCCACTCGATCTGCTGCTTATCTAAATGGAGCTTCCCGCCCAGTGCTACCTCATTGGTCATCCTTAACATTGCCAGCAAACAAGTATGTCAAGCGGAGAAGGTTGGGTGGAAATAACAGCAAACATACTAACTATGAGGTTCATTTTAGACCATCTTTACTAAGATGCTATTTGAACTTCAAGAAAAGTGGGAGACCAGAACGTTTGATGTTCTATCAGAGTGGTGAATGGATGGACTTCCCTCAGGATGTTGTCGACTTGGTTAAAAGAGATCTAGAGGTAAAGAAGGCAGCCATGGAAGTAGAATTCAATGGCCATCATCTTGTGCTAGATTTTCTGCACATGTATCAGATGGACTTGAAAACTGGTTCACAGCAACCTATTGCCTGGATTGATGAGAAAGGTTGCTGCTTCTTTCCTGAAGTCTTTGCTGCTTCCAATGATGAGCCACATGGTTTTTCCAAGAAGGATGTTGGAAGAGTGCATGATCATATGTGCGAGGAGCCTTATGAATCTAATGAGATAAAATTGCATTTGGAAATTGAAATAAATGGACTGGATGAATCCAAGTTGAGGGAATGTAGTGGTGAGTCAAATGCTCTAGTTCAGCATATCCAAATTGATGCAAAGCGTGCCTGCAATCAATATGATGTAGAAGTTGAAGATAGCAGTAATAAGCTTGGTAATGGAAATTTTGGTGAGGCCATTGAACAAAATCAAGAGATAGGTTTAGATACATATAATGAATCTGTAAATGGAAAATTGGATTTGGATACTGTACAGAAGATGTTTCTTAAGGGCATGAGTAGTTATGGCACTATTGACATAGTGGAGATATACCGCTGCTCCAGTACTTTGATGCAATTCCGGTTGGAGCTTTTCCAGAAGCAGGTTGAAATTACAAGTAAGTGTCGTGGGGGTGCTAATGTTCAATATGCTTGGCTTGCTTCTTCAAAAGGAGAACTGTCTACAATCATGAAGTATGGGCTTGGGCATTGCGGTCTATCTGCAACTAAATCCACATATGGAATAGGTGTTCATCTTGCAGCTGCTGACTGTCCTAACTCGAGTGCAATTAATTGTGATGTTGACGAAAATGGGGTACGACACATGGTGTTTTGTCGTGTAATAATGGGGAACATGGAGCTTCTCTGTCCTGGCACTAGACAAATTCGCCCCAGTAGTAGTGACTATGATAGTGGGGTAGATGACATTCAAAGTCCAAGATACTATGTAGTATGGAATATGAATTTGAATACCCACGTCTATCCAGAATTCGTTGTTAGTTTCAAGGTTTCTTCTGATGCTGAAGGGCATCTTTTTGACAGAGAGAGTGAATATAATGTTTCCGGGGTTACCTCAGCTTGTCGAGGCCCTCAAGGCCCGTTACAATCCAAGTCTTCTACTGTACATATGAGCATTAGCCAACCAACTTTAGATGCTGGGGTGCCTCTGGGGAAAGCTGCTAGTCTGACTGCTAGCACTCCAAGAGCTCCAAAATCCCCTTGGATGCCTTTCCCTATGCTTTTTGCTGCTATATCAAACAAGGTTCCCCCCAAGGACATGGAGCTTATCAATACACATTATGAACAATTCAGGGCAAAGAAGATAGCTCGTGATGATTTTGTGAAGAAGTTGAGATTGATAGTTGGAGATACTCTATTGAGAACTACAATAACAAACCTTCAATGCAAGATACCATCCAAATCATTGTGA 1776 0.4144 METNIAKALDRAVLNLKRKRATRSAAYLNGASRPVLPHWSSLTLPANKYVKRRRLGGNNSKHTNYEVHFRPSLLRCYLNFKKSGRPERLMFYQSGEWMDFPQDVVDLVKRDLEVKKAAMEVEFNGHHLVLDFLHMYQMDLKTGSQQPIAWIDEKGCCFFPEVFAASNDEPHGFSKKDVGRVHDHMCEEPYESNEIKLHLEIEINGLDESKLRECSGESNALVQHIQIDAKRACNQYDVEVEDSSNKLGNGNFGEAIEQNQEIGLDTYNESVNGKLDLDTVQKMFLKGMSSYGTIDIVEIYRCSSTLMQFRLELFQKQVEITSKCRGGANVQYAWLASSKGELSTIMKYGLGHCGLSATKSTYGIGVHLAAADCPNSSAINCDVDENGVRHMVFCRVIMGNMELLCPGTRQIRPSSSDYDSGVDDIQSPRYYVVWNMNLNTHVYPEFVVSFKVSSDAEGHLFDRESEYNVSGVTSACRGPQGPLQSKSSTVHMSISQPTLDAGVPLGKAASLTASTPRAPKSPWMPFPMLFAAISNKVPPKDMELINTHYEQFRAKKIARDDFVKKLRLIVGDTLLRTTITNLQCKIPSKSL 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1352 591 SUPERFAMILY ADP-ribosylation 278 452 - -
Dere09g1352 591 ProSiteProfiles PARP catalytic domain profile. 254 471 IPR012317 GO:0003950
Dere09g1352 591 Gene3D - 272 455 - -
Dere09g1352 591 ProSiteProfiles RST domain profile. 517 588 IPR022003 -
Dere09g1352 591 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 60 585 IPR044964 -
Dere09g1352 591 ProSiteProfiles WWE domain profile. 75 150 IPR004170 -
Dere09g1352 591 Pfam RCD1-SRO-TAF4 (RST) plant domain 518 583 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1352 Dere-ChrDere09 17563797 17569466 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1352 09 17563797 17569466 Dere09g1352 09 17563797 17569466 ECH