Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1340 ATGGATCGCAATGGGGGAGAGAGCTGGAGGGAATTGATGAAGAAGATGCTTCCTCCTGGAGCTTCTCTCCCTGATGAAGCTTCTGATCTTGACTACTCCATAGCCATGGAATATAAGGGCCCACCAGTTTCATATGAAGTACCAAGAGTTGATCCTCTTGATGTAAATTCACGAGCAGTACCACGTTCTGGATCACAACGATCCATTACTCGTGTGGGGCCTCCGGTAATTGAACCAATTCCTCTGCCAGTGTCTCGTATTGCTGGTGTGACAAGTTCTCCTAATCAAAGTCCAAGGATATCAGGAAGTTCAGAATCTGTAGTGTCTGTCTTGCAAAATCCTGATTTTTCTTCTGCTTCACCTTCAGCCTCACCTGGTTCAGTTCATAATCCTCCTAAACAAGTAGTTAATGAAGCTAAGAGGGCACCTGTTGTAACTTTTAATACTGTTGATAAATCTGAGAAAAAGCAAGTTGATGATGGGAAGCCAGTATATCCAGAATATGTTGGGGTTTCAAAGGAAAGGAAGAAAAAGAGAATCAGAGTTTGTTATAGATGTGGAAAAGGGAAGTGGGAAACTAAGGAATCTTGCCTAGTTTGTGATGCCAAGTATTGCAGCAATTGTGTGCTTAGGTCAATGGGATCAATGCCTGAAGGGCGCAAATGCGTAACATGCATTGGACAGCCTATTGATGAATCAAAGCGTCTGAAATTAGGTAAACATTCTAGGGTATTATCTCGACTTCTTAGTCCTTTAGAAGTTAAGCAAATTATGAAAGCAGAGAAAGTATGTTCTGCCAATCAGCTCCGGCCAGAACAGCTGATGGTTAATGGAATCCCTCTGAAGCCAGAAGAAATGGCAGAATTACTTGGATGCCCCTTACCTCCACGAAAGCTGAAGCCTGGTAGATATTGGTATGACAAAGAATCTGGTTTCTGGGGAAAGGAAGGGGAAAAACCTGACAAAATCATAAGTTCAAACTTGAACTTCACTGGGAAACTTAGTGCTGAGGCTAGTAATGGAAATACCGAAGTTTACATCAACGGTCGAGAGATTACAAAACTTGAATTGAGGATACTGAAGCTGGCAAATGTGCAGTGTCCACGTGATACACACTTTTGGGTTTATGATGATGGTCGTTATGAGGAAGAAGGTCAGAATAATATCAGAGGAAACATTTGGGAGAAGGCTTCAACAAGATTTGTTTGCACCCTGTTCTCTTTGCCCTTTCCCCATGGAAAACCTCATGGACCAAGGGATGAGATTAGTAATTATACTACAGTTCCAAATTATCTGGAACAGAAAAAAGTTCAGAAGCTTCTTCTTCTTGGACTTCAAGGATCTGGAACTAGCACTCTCTTTAAGCAGGCCAAAATCTTGTATGGGAACAGATTTACTGCAGAAGAGCTGCAGGATATCAAGCTGATGATTCAGAGTAACATGTACAAATATCTTAGCATTTTGCTTGATGGAAGAGAGCGCTTTGAGGAGGAGGCTCTTTCTAAAATGAATACAAACAGTTCTTCTAGTCAAACTACAGGACAAGTTAGGAACAGTGAAGCAACTGAAACTAGTCTATGCATCTATTCCCTAAACCCAAGGCTGAAGCATTTCTCTGACTGGCTCCTGGATATTATAGCTACTGGGGATTTAGATGCATTCTTCCCAGCAGCCACACGTGAATATGCACCATTAGTCGAAGAAGTGTGGAAGGACCCAGCAATACAAGACACCTATAAAAGAAAAGATGAGCTTCACTTTCTTCCAGATGTGGCAGAATACTTCTTAAGCCGGGCTGTTGAGATATCTAGCAATGAATACGAACCTTCTGAAAGAGACATTATATATGCAGAAGGGGTCACTCAGGGAAATGGTTTAGCTTTCATAGAATTCTCACTTGATGACCGGAGCCCAATGTCTGAAGTTTACACAGAAAATATGGAAGCTCAGTCACCACCTCTGACCAAGTACCAACTTATAAGGGTAAATGCCAAGGGGATGAATGAGGGTTGTAAGTGGGTGGAAATGTTTGAAGATGTTCGAGCAGTAGTCTTCTGTGTCGCCCTGAGTGACTTTGATCAGTTGTGGCTTGCCCCGGACAGCAGTGGCAGTGGAACCCTTCTTCAAAACAAGATGATACAAAGCAAGGAGCTATTTGAGACCATGGTCAGGCACCCTTGCTTTAAAGACACTCCTTTTGTTTTGGTTTTGAACAAGTATGATATCTTTGAGGAAAAGATCAATAGGGTGTCTCTATCTGCCTGTGAGTGGTTCAATGATTTTTGTCCTGTGAGTGTTCATCACAATAACCAGTCACTGGCACATCAGGCATACTTCTATATTGCCATGAAATTCAAGGACCTTTATGCCTCCCTCACCGGCCGAAAACTTTTCGTGTGGCAAGGCCGGGCAAGGGACCGAGTGACTGTTGATGAGGCATTCAAGTACATTAGGGAAGTCCTCAAATGGGATGAGGAAAAGGAGGAGAATTACTATGGTCCACCGGAGGATTCATATTACAGCACTACAGACGTAAGCTCCTCTCCTTATGTCAGACGAGAGTAA 2565 0.4273 MDRNGGESWRELMKKMLPPGASLPDEASDLDYSIAMEYKGPPVSYEVPRVDPLDVNSRAVPRSGSQRSITRVGPPVIEPIPLPVSRIAGVTSSPNQSPRISGSSESVVSVLQNPDFSSASPSASPGSVHNPPKQVVNEAKRAPVVTFNTVDKSEKKQVDDGKPVYPEYVGVSKERKKKRIRVCYRCGKGKWETKESCLVCDAKYCSNCVLRSMGSMPEGRKCVTCIGQPIDESKRLKLGKHSRVLSRLLSPLEVKQIMKAEKVCSANQLRPEQLMVNGIPLKPEEMAELLGCPLPPRKLKPGRYWYDKESGFWGKEGEKPDKIISSNLNFTGKLSAEASNGNTEVYINGREITKLELRILKLANVQCPRDTHFWVYDDGRYEEEGQNNIRGNIWEKASTRFVCTLFSLPFPHGKPHGPRDEISNYTTVPNYLEQKKVQKLLLLGLQGSGTSTLFKQAKILYGNRFTAEELQDIKLMIQSNMYKYLSILLDGRERFEEEALSKMNTNSSSSQTTGQVRNSEATETSLCIYSLNPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVEEVWKDPAIQDTYKRKDELHFLPDVAEYFLSRAVEISSNEYEPSERDIIYAEGVTQGNGLAFIEFSLDDRSPMSEVYTENMEAQSPPLTKYQLIRVNAKGMNEGCKWVEMFEDVRAVVFCVALSDFDQLWLAPDSSGSGTLLQNKMIQSKELFETMVRHPCFKDTPFVLVLNKYDIFEEKINRVSLSACEWFNDFCPVSVHHNNQSLAHQAYFYIAMKFKDLYASLTGRKLFVWQGRARDRVTVDEAFKYIREVLKWDEEKEENYYGPPEDSYYSTTDVSSSPYVRRE 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1340 854 FunFam Extra-large guanine nucleotide-binding protein 3 466 618 - -
Dere09g1340 854 FunFam Extra-large guanine nucleotide-binding protein 3 632 830 - -
Dere09g1340 854 Pfam G-protein alpha subunit 434 820 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dere09g1340 854 MobiDBLite consensus disorder prediction 1 27 - -
Dere09g1340 854 MobiDBLite consensus disorder prediction 88 131 - -
Dere09g1340 854 ProSiteProfiles G-alpha domain profile. 436 832 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dere09g1340 854 SUPERFAMILY FYVE/PHD zinc finger 167 226 IPR011011 -
Dere09g1340 854 SMART galpha_1 426 799 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dere09g1340 854 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 434 827 IPR027417 -
Dere09g1340 854 CDD G-alpha 451 824 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dere09g1340 854 PRINTS Alpha G protein (transducin) signature 680 708 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dere09g1340 854 PRINTS Alpha G protein (transducin) signature 733 742 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dere09g1340 854 PRINTS Alpha G protein (transducin) signature 439 454 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dere09g1340 854 PRINTS Alpha G protein (transducin) signature 607 629 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dere09g1340 854 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 213 825 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dere09g1340 854 SUPERFAMILY Transducin (alpha subunit), insertion domain 465 617 IPR011025 GO:0007165
Dere09g1340 854 MobiDBLite consensus disorder prediction 55 74 - -
Dere09g1340 854 Gene3D - 630 830 IPR027417 -
Dere09g1340 854 MobiDBLite consensus disorder prediction 828 854 - -
Dere09g1340 854 Gene3D - 467 618 IPR011025 GO:0007165
Dere09g1340 854 MobiDBLite consensus disorder prediction 88 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1340 Dere-ChrDere09 17449871 17454581 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1340 09 17449871 17454581 Dere09g1340 09 17449871 17454581 ECH