Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1330 ATGCGCTACCGCGATCCCAACCCATTTGACGAAGAAGAGCATGAAGAGGTCAATCCCTTTTCGAATGGTGCTGGTGCTCCTGGATCAAAATTGCGTGTTCCTCCAGTGGCATCTGACCCACTGGGCTTTGGTCAAAGAGATGATGCTACAGTTGATATTCCATTAGAGAATACAAATGTCTCTAAGAAAAGGGTGCAAGAGCTTGCAGCTTGGGAAGCAGATCTAAAAAGAAGAGAAAAGGAAATCCAACGAAGAGAAGATGCAGTTGCCAAAGCTGGGCTTCCTCTTGACGATAAGAACTGGCCTCCATTTTTCCCAATCATTCACCATGATATAGCCAATGAGATACCTGTTCATGCCCAACGGCTGCAATATTTGGCATTTGCAAGTTGGTTAGGGATTGTTCTCTGTCTGGTTTTTAATGTAGTTGCTGTGATTGTCTGTTGGATCAGAGGCGGTGGCGTTAAAATTTTTTTCCTTTCAGTGATCTATGCTCTACTTGGAGTCCCCCTTTCATATGTGCTTTGGTACAGGCCCCTCTATCGTGCTATGAGAACGGATAGTGCACTGAAGTTTGGTTGGTTTTTCATGTTCTATTTGCTGCATATTGGTTTTTGTGTCTTTGCTGCTATTGCGCCTCCAATTGTCTTTCATGGAAAGTCATTAACGGGCATTCTTGCGGCAATTGATGTCTTCTCAGACCATGTGTTGGTTGGGATATTCTATTTGGTTGGATTTGCTTTGTTTTGCTTGGAGACTCTTTTAAGCTTGTGGGTGCTTCAGAAAATTTACATGTATTTCAGGGGGCACAAATGA 816 0.4338 MRYRDPNPFDEEEHEEVNPFSNGAGAPGSKLRVPPVASDPLGFGQRDDATVDIPLENTNVSKKRVQELAAWEADLKRREKEIQRREDAVAKAGLPLDDKNWPPFFPIIHHDIANEIPVHAQRLQYLAFASWLGIVLCLVFNVVAVIVCWIRGGGVKIFFLSVIYALLGVPLSYVLWYRPLYRAMRTDSALKFGWFFMFYLLHIGFCVFAAIAPPIVFHGKSLTGILAAIDVFSDHVLVGIFYLVGFALFCLETLLSLWVLQKIYMYFRGHK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1330 271 Coils Coil 68 88 - -
Dere09g1330 271 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 4 270 IPR007273 GO:0015031|GO:0016020
Dere09g1330 271 MobiDBLite consensus disorder prediction 1 18 - -
Dere09g1330 271 Pfam SCAMP family 99 269 IPR007273 GO:0015031|GO:0016020
Dere09g1330 271 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1330 Dere-ChrDere09 17362740 17373590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1330 2 271 Miscellaneous Gene Families AT1G32050 73.704 1.25e-148 414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1330 09 17362740 17373590 Dere09g1330 09 17362740 17373590 ECH