Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1251 ATGAATATTAGTGGAGGAAGAAGCAAAAGTGGTAGCTTCAGATCAAAGGGAAGCTTTAAGTTGGGAGTTTTAGGGTCAATGAGAAAAAGCGATAGCACTAAGGATCACACTGTGGTTCAGCTTGGAAGTATAGACACACACAGGCTCCTTCTTGGAGGAGAGAGAGAGAAACAGCTTCTTCAAACACTTCCCACCAACTCTCTCTCTCCCAGACACATGAAAGCCGTCACTGCTCTCTGTGACACCATCTTACCTTCCCTCAACGACGTCGTCTTCCCCCTCGACCCCTCCTTCGACCCTCTCGCCACCTTCTACCGCACTTCTGCCTCCATGGCTGGAACCCACGAGCGTGTTGGGGGCATAATTAGTGAGAAACTGAAGCACCCCAACACTCCCTTACTGAAGTTGGTGCTGTGGTTTCTATCAACTTGGGTTGGCACGTTGGCAATTTGTGGCCTACCAAGCCTCTCTCTTGCCTTCCCTTTCTTCCATACTCTTCATCATCTTCCTCACCATAAACGACAACGTATTATGAGGTCTTGGTCTTTCAGTTGCTTTCGTCACCTTCGCATGTTAGCCAGGACCCTCAAAATTCTCACTCTCCTCGTCTTCTTCACTCAGCTAGATGAAGCAGAAGACAACCCATCATGGAAAGCAATTGGGTACGCCGGTCCCGATCCGGAATTCAAAGCACAGTTAAAGAACCATTTCCTACAAGGAACATCAAAAGAACCAGGAGGACAAGACCAGAAGCAAGATGACGTGGAAGATGATGCTGAAGAGGTAGTAGGACCTCTTTACAAGGGTATTGTCCATCTGAACTGCCCGCGAGATATCACAGTTGATGCTCTGCGACGGCGAGGATTCCCTGTCTCTGTCCTTCGCCGGAGAACCAAAGCTTCTACCTTGTCATCTCCTTCCTTAGTCATCCAATGCGATGTAGTGGTGGTTGGTTCTGGCTCGGGAGGCGGTGTAATAGCTGGGGTTCTGGCAAAAGCCGGTTATAAAGTTCTGGTCTTGGAGAAAGGAAGCTACTCTGCAAGAAACAATCTTTCTCTTCTTGAAGGACCAACCATGGATCAAATGTACCTTTCCAATGGTTTGATTGCTACTGATGATATGAGCATGTTCGTACTAGCAGGATCAACTGTTGGTGGAGGATCTACAATTAACTGGTCAGCTTGTATTAAAACTCCGAAGCATGTCTGCAAGGAGTGGAGTGAACGGTATGAGCTAGAGCTTTTTGAAAGTAAATTATACAGAGAAGCCGCGGATGTCGTCCTTGAGAAGATGGGAGTTCAATCTGAAATCACAGACGAAGGTTTCAATAATGCAGTCTTAAGAAGAGGGTGTCAAGAGATGGGTTACCCTGTGAGTACGATTCCTCGAAATTCTCCACCGGATCACTACTGTGGCTGGTGCTGTTTGGGCTGCAAGGACGGGAGCAAGAAGGGTACATCAGAGACGTGGTTGGTGGATTTGGTGAAATCTGGGAATGGAGCTATTCTTCCCAGTTGCGAGGCAATTAAAGTCCTGCACAAGAAATATGAAGGAAAGGGTCGAAAAATTGCCCAAGGAGTTGCTTTTGAGTATGAATACAAGGGAGCTAAGGATATTTGTAGTGTGGAATCCAAGGTCACTATTGTAGCATGTGGAGCACTCTGTACTCCAGCATTGCTCAAAAGAAGCGGCTTGAAGAATAAGAACATAGGGAGACACCTGCATCTTCATCCAGTGACAATGGCATGGGGATACTTCCCAGACACACCTTCAACTGATTCCCAGGTGTGGCCTGAAAAACATAAGAAGAGCTATGAAGGAGGAATAATGACAGCAATGTCTACTGTAGTTGCAGATTTTGAGAAATCAGGATACGGTGCTGTGATACAAACACCAGCATTACATCCTGGTATGTTCTCTATTCTAATGCCCTGGGTTTCTGGGATGGACATAAAAGATCGAATGCGCAGGTTTTCCAGAACAGCACATATATTTGCACTTGCAAGAGATCAAGGGTCAGGGACTGTGAGGTCTCCATCCAATATCAATTACCGGATGAATGATGTTGATGAAAAGAATTTGCAAAAAGGAATTGAGAAGGTACTGAGGATTCTTGCAGCAGCTGGGGCTGAAGAAATCGGGACTCATCATGACAAAGGAAGGACCTTGAATGTGAAGCAGGTGAGCTATCATGAGTTTGAGAAGTTCGTAAAAGAGGAGAGTTCAAGGCCATTAACAGACCTTACAACCCCATTATGTTCAGCACATCAGATGGGGAGCTGTCGGATGGGTGCGAGTCCAAAAGACTCAGTCGTGAACCAGATGGGAGAGACATGGGAGATAGAGGGACTTTATGTCGCAGATACAAGTGTGTTCCCAACAGCTTTGGGTGTAAATCCAATGGTCACTGTACAGGCTATTGCTTATTGCACAGCACAATCTGTTCTTGAAGTTCTTAGAAGGAAAAGATCTAGATGA 2478 0.4617 MNISGGRSKSGSFRSKGSFKLGVLGSMRKSDSTKDHTVVQLGSIDTHRLLLGGEREKQLLQTLPTNSLSPRHMKAVTALCDTILPSLNDVVFPLDPSFDPLATFYRTSASMAGTHERVGGIISEKLKHPNTPLLKLVLWFLSTWVGTLAICGLPSLSLAFPFFHTLHHLPHHKRQRIMRSWSFSCFRHLRMLARTLKILTLLVFFTQLDEAEDNPSWKAIGYAGPDPEFKAQLKNHFLQGTSKEPGGQDQKQDDVEDDAEEVVGPLYKGIVHLNCPRDITVDALRRRGFPVSVLRRRTKASTLSSPSLVIQCDVVVVGSGSGGGVIAGVLAKAGYKVLVLEKGSYSARNNLSLLEGPTMDQMYLSNGLIATDDMSMFVLAGSTVGGGSTINWSACIKTPKHVCKEWSERYELELFESKLYREAADVVLEKMGVQSEITDEGFNNAVLRRGCQEMGYPVSTIPRNSPPDHYCGWCCLGCKDGSKKGTSETWLVDLVKSGNGAILPSCEAIKVLHKKYEGKGRKIAQGVAFEYEYKGAKDICSVESKVTIVACGALCTPALLKRSGLKNKNIGRHLHLHPVTMAWGYFPDTPSTDSQVWPEKHKKSYEGGIMTAMSTVVADFEKSGYGAVIQTPALHPGMFSILMPWVSGMDIKDRMRRFSRTAHIFALARDQGSGTVRSPSNINYRMNDVDEKNLQKGIEKVLRILAAAGAEEIGTHHDKGRTLNVKQVSYHEFEKFVKEESSRPLTDLTTPLCSAHQMGSCRMGASPKDSVVNQMGETWEIEGLYVADTSVFPTALGVNPMVTVQAIAYCTAQSVLEVLRRKRSR 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1251 825 Gene3D - 298 628 IPR036188 -
Dere09g1251 825 SUPERFAMILY FAD/NAD(P)-binding domain 310 817 IPR036188 -
Dere09g1251 825 Gene3D - 739 822 IPR036188 -
Dere09g1251 825 Pfam GMC oxidoreductase 681 810 IPR007867 GO:0016614
Dere09g1251 825 Pfam GMC oxidoreductase 313 579 IPR000172 GO:0016614|GO:0050660
Dere09g1251 825 PIRSF Lg_Ch_AO 54 825 IPR012400 GO:0046577
Dere09g1251 825 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 65 824 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1251 Dere-ChrDere09 16424020 16431821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1251 34 819 Acyl Lipid Metabolism Gene Families AT4G19380 56.329 0.0 847
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1251 09 16424020 16431821 Dere09g1251 09 16424020 16431821 ECH