Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1247 ATGGGCTCCCAGGGAGGGTTCGGGCAATCCAAGGAGTTCCTTGATCTGGTCAAGTCCATTGGTGAAGCTCGATCCAAGGCCGAGGAAGACAGAATCGTCCTCCATGAGATCGAAACCCTCAAGCGTCGTATAATTGAGCCTGACATTCCCAAGCGCAAGATGAAGGAGTACATCATTCGCCTTGTTTATGTGGAGATGCTTGGCCACGATGCCTCTTTTGGGTATATCCACGCCGTTAAGATGACCCACGACGACAATCTCCTCCTTAAACGTACTGGTTATTTGGCCGTGACCCTTTTTCTGAATGAAGACCACGATTTGATTATCCTCATCGTCAATACCATTCAGAAGGACCTCAAGTCCGATAATTATTTGGTTGTTTGTGCTGCCCTTAATGCCGTTTGTAAGTTGATCAATGAAGAGACTATCCCAGCTGTACTGCCGCAGGTGATCGAGCTTTTGGGTCATTCCAAGGAGGCCGTTCGAAAGAAGGCTATCATGGCCCTTCATCGCTTCTATCAGAAATCACCTTCTTCAGTGTCACATTTGATCTCCAATTTCCGCAAGAGATTGTGTGATAATGATCCTGGTGTAATGGGTGCCACGTTATGCCCTCTTTTTGATCTTATAACGAATGACGTTAATTCTTACAAGGATCTCGTCATCAGCTTTGTGAGCATTCTTAAACAAGTAGCAGAACGCAGATTGCCAAAGAGCTATGATTATCATCAGATGCCCGCTCCATTTATTCAGATTAAATTGCTGAAAATCTTGGCATTGTTGGGAAGTGGTGACAAGCAAGCAAGTGAAAACATGTATACTGTAATCGGCGATATAATAAGGAAAGGCGATCCATCAAGTAATATTGGGAATGCTATTCTCTATGAATGCATATGCTGTGCCGCTTCCATATACCCCAATCCTAAGTTAATAGAAGCTGCTGCAGATGTTATCGCAAAATTTTTAAAGAGTGACAGTCATAATCTCAAGTACATGGGCATTGATGCCCTTGGTCGGCTAATAAAGTTAAGTCCGCAAATTGCAGAACAACACCAACTGGCCGTGATTGACTGCTTAGAGGACCCTGATGATACTCTGAAGCGAAAAACATTCGAATTGCTATACAAAATGACCAAATCCTCTAATGTGGAAGTGATTGTTGACCGTATGATTGAATACATGATTAGCATAAGTGATGATCATTATAAAACCTATATAGCATCTCGATGTGTGGAACTTGCTGAGCAATTTGCACCTAGTAATCACTGGTTTATACAGACTATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTGAATATCAAGGTAGCACATAATTTGATGCGGTTGATTGCAGAAGGATTTGGAGAGGATGATGATGCTGCTGATAGTCAGTTGAGATCATCAGCTGTTGAGTCATATCTGCACATTGTTGGAGAACCAAAGCTGCCATCTGTATTTCTTCAAGTCATTTGTTGGGTTCTGGGGGAATATGGCACAGCTGATGGAAAGCATACTGCTTCCTATATCACTGGGAAGTTATGTGATGTGGCAGAGGCATATTCTGATGATGAAACTGTTAAGGCATATGCAACTTCAGCTCTGAAGAAAATTTATGCATTTGAAAAAGCAGCAGAGAGGAAAGTAGATATGCTACCTGAGTGTCAATCTTTGATTGAAGAACTGTTAGCATCCCACTCTACAGATTTGCAGCAGCGTGCCTATGAATTGCAAGCTCTTATTGGGTTGGACAGACAAGCTGTTGAATCTATAATGCCACAAGATGCAAGTTGTGAAGATATTGAGGTTGACAAGAAGCTTTCATTTCTCGATGGTTATGTCCAACAGTCTCTAGAAAGGGGTGCCCAACCTTACATTCCTGAGGATGTGCGCATTGGAATGGGGGATATGAGCAACTTTAGAGGCCAAGATAAGCATGAATCTTCACAGCATGGACTGAGATTTGAGGCATATGAACTGCCCAAGGCTCCAGCACCATCAAAAGCTACTCCAGTTTCACTTGCATCTGCAACTGACCTAGTTCCAGTACCTGAGGCATTATATTCTAGGGAGACCCACCCTATCTCATCAGTGGCATCAGCATCAGAAGCAGGATCTTCTGGACTTAAGCTTCGGCTTGATGGTGTTCAGAGGAAGTGGGGCAGGCCAACATATTCATCTCCTACCCCATCTAATACTTCAGACTCTTCTTCCCAAAAACCAGTGAATGGGGTGACCCAGGTGAATGGTGCGAGTGCAGGAAATTCAAAAGTACGGGATAGTTATGATTCAAGAAAGACACCAGTTGAAATTTCTCCTGAAAAGCAGAAACTTGCTGGTCTATTGTTTGGTGGTTCAAGTAAGCCTGAAAAAAGACCTTCAGCTAGCCATAAGGTTCCAAAGGCAAATGTCAGTTCTGCAGACAGATCTCAGGAATTGAAGACAGCAGTTGTATCAGATGAAGTAGCCGGAGAGAAAACAAATCATCAACCTCCTCCAGATCTGCTTGACTTGGGGGAACCAACTGGTACGACTGCTCCTCCCTCTAATGACCCATTCAAGCAGTTGGAAGGACTTCTTGACCCAAGCCTTAGTTCAAAAATAGATCATAGCGCAGGTGCTACTACAAAAGGGCCTGATATTATGGCACTATATGGAGGGACAACCACAAGCGGGCAAAGTGCAAGTGGTGGCTATTCTGTCCCTGCGAGTGGAGAGGTAAATCTTTTATCCGAGTTGTCAAATGCAGCGGTCAGTGGTGCTCCTGGAGAAACAACTGCAACGCCATCATCTCAATCTGTGAAGGGTCCAAACCCTAAAGAATCCTTGGAGAAGGATTCACTGGTGAGGCAGTTGGGTGTGAACCCATCGAGTCAGAATCCCAACTTGTTTAGAGACTTGCTTGGCTAA 2910 0.4385 MGSQGGFGQSKEFLDLVKSIGEARSKAEEDRIVLHEIETLKRRIIEPDIPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLVVCAALNAVCKLINEETIPAVLPQVIELLGHSKEAVRKKAIMALHRFYQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITNDVNSYKDLVISFVSILKQVAERRLPKSYDYHQMPAPFIQIKLLKILALLGSGDKQASENMYTVIGDIIRKGDPSSNIGNAILYECICCAASIYPNPKLIEAAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPQIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIEYMISISDDHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDAADSQLRSSAVESYLHIVGEPKLPSVFLQVICWVLGEYGTADGKHTASYITGKLCDVAEAYSDDETVKAYATSALKKIYAFEKAAERKVDMLPECQSLIEELLASHSTDLQQRAYELQALIGLDRQAVESIMPQDASCEDIEVDKKLSFLDGYVQQSLERGAQPYIPEDVRIGMGDMSNFRGQDKHESSQHGLRFEAYELPKAPAPSKATPVSLASATDLVPVPEALYSRETHPISSVASASEAGSSGLKLRLDGVQRKWGRPTYSSPTPSNTSDSSSQKPVNGVTQVNGASAGNSKVRDSYDSRKTPVEISPEKQKLAGLLFGGSSKPEKRPSASHKVPKANVSSADRSQELKTAVVSDEVAGEKTNHQPPPDLLDLGEPTGTTAPPSNDPFKQLEGLLDPSLSSKIDHSAGATTKGPDIMALYGGTTTSGQSASGGYSVPASGEVNLLSELSNAAVSGAPGETTATPSSQSVKGPNPKESLEKDSLVRQLGVNPSSQNPNLFRDLLG 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1247 969 MobiDBLite consensus disorder prediction 951 969 - -
Dere09g1247 969 PIRSF AP4_epsilon 932 969 IPR017109 GO:0015031|GO:0030124
Dere09g1247 969 PIRSF AP4_epsilon 685 831 IPR017109 GO:0015031|GO:0030124
Dere09g1247 969 PIRSF AP4_epsilon 1 677 IPR017109 GO:0015031|GO:0030124
Dere09g1247 969 MobiDBLite consensus disorder prediction 692 880 - -
Dere09g1247 969 MobiDBLite consensus disorder prediction 915 969 - -
Dere09g1247 969 MobiDBLite consensus disorder prediction 799 813 - -
Dere09g1247 969 MobiDBLite consensus disorder prediction 915 938 - -
Dere09g1247 969 MobiDBLite consensus disorder prediction 722 758 - -
Dere09g1247 969 Gene3D - 3 594 IPR011989 -
Dere09g1247 969 SUPERFAMILY ARM repeat 27 625 IPR016024 -
Dere09g1247 969 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 15 817 - -
Dere09g1247 969 Pfam Adaptin N terminal region 49 582 IPR002553 GO:0006886|GO:0016192|GO:0030117
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1247 Dere-ChrDere09 16362096 16368995 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1247 09 16362096 16368995 Dere09g1247 09 16362096 16368995 ECH