Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1221 ATGAAGACACAATCATGTGGGATCGATGGTGCTTGTTTTGTCATAATCCCCCATTCACCTAAGCCAGTGGTGGATTTGCTGTTCAATTTCACTTCTTCAATTGAGCTTCATCTTCCTCGTGTTGCCTCTCTGCCTTCACTTGAACCATATAAAAGGCAACAAAAAACAGCCGTAGGTAAGGAAGCTGAACTGTACGGACTGCAAGGATTGGTATTTGTATTTGGAAGAATAGTAATAATGGGATTTCTACAGTTGCTTAGTGTTGCCTCAATCCCGGTGATCAAATTATTAATATTGACTGCACTTGGCTTATTTTTGGGACTTGATCGCATAGATTTATTGGGAGGAACTGCAAGGAATCTACTGAATCATATAGTGTTTTATGTTTTCAATCCTGCATTGGTGAGTAGCAATTTGGCCGAGACAATCACTTTGGAGAGTTTTGTTTCGCTGTGGTTCATGCCAGTCAATATTCTTATAACATTTGTAGTAGGCTCGGCTTTGGGATGGGTCATTGCTAAAATCACAAGGGCTCCCAAACACTTGGAAGGTCTGATACTGGGTTGCTGTTCTGCAGGTAATCTAGGAAACTTGCCTATAATCATTATCCCAGCCATATGTAGAGAGAAAGGCAGTCCATTTGGGGATTCTGCAATCTGCTATAAATATGGAATGGCTTATGCTTCGCTTTCTATGGCGATTGGAGCCATTTATATATGGGCTTATGTTTACAACATAATGCGGATTTTCTCGAGAAATGTTCCCAGTGTAGATAACATAAGTGATGAATCCAGCATGTTAAAGCCTTCAGGGGAAAAAACTGAACCATTCCCAGAGATATGCACAGAAGCACAGAGCCCTGTAAAAGACGCCATGGATGATGCATATATCATGTTGCTTCCTGACTCAAAATCTGAGGAAAAAATGAAGGTACCAGTACCAGGAAAAATCCAGAACTACTTGATCACGATTTTATGTAACCTCAACATCAGGGCCGTTTTGGCGCCATCAACCATTGGGGCGATTGCTGGCTTTTCGATAGGTTTGGTTTCCCCGATACGTAAAATTATGATTGGCAGTGATGCTCCACTTCGCGTGATCGAAGACTCTGCTACTATGCTGGGTGATGCGTGCATCCCATGTGTAACCCTTATAATGGGTGCCAACCTCCTTAAAGGCTTGAAGGGAACAGGCAGTCAATTGTCGGCCATTGTTGGAATCATAGCAGTTCGATATATTTTCCTGCCATTGTTGGGCGTTCTAATCATTAGAGGAGCAGTACATGTTGGTGCTGTGCCATCATCAGATCCCTTATACCAGTTTATGCTTCTACTTCAATATGCACTTCCTCCAGCTATGGCTATAGGCACGATAGCTCAGTTGTTTGGAGCTGGTGAGAGTGAATGCTCTGTTATCATGTTGTGGACATATGTTTTGGCATCTGTTGCAGTTACTCTTTGGTCAACCTACTTCATGTGGCTAGTGGCCTGA 1491 0.4259 MKTQSCGIDGACFVIIPHSPKPVVDLLFNFTSSIELHLPRVASLPSLEPYKRQQKTAVGKEAELYGLQGLVFVFGRIVIMGFLQLLSVASIPVIKLLILTALGLFLGLDRIDLLGGTARNLLNHIVFYVFNPALVSSNLAETITLESFVSLWFMPVNILITFVVGSALGWVIAKITRAPKHLEGLILGCCSAGNLGNLPIIIIPAICREKGSPFGDSAICYKYGMAYASLSMAIGAIYIWAYVYNIMRIFSRNVPSVDNISDESSMLKPSGEKTEPFPEICTEAQSPVKDAMDDAYIMLLPDSKSEEKMKVPVPGKIQNYLITILCNLNIRAVLAPSTIGAIAGFSIGLVSPIRKIMIGSDAPLRVIEDSATMLGDACIPCVTLIMGANLLKGLKGTGSQLSAIVGIIAVRYIFLPLLGVLIIRGAVHVGAVPSSDPLYQFMLLLQYALPPAMAIGTIAQLFGAGESECSVIMLWTYVLASVAVTLWSTYFMWLVA 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1221 496 PANTHER - 80 495 IPR045033 GO:0080162
Dere09g1221 496 Pfam Membrane transport protein 90 487 IPR004776 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1221 Dere-ChrDere09 16080664 16086866 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1221 09 16080664 16086866 Dere13g0864 13 10877125 10884450 CCT
Dere09g1221 09 16080664 16086866 Dere09g1221 09 16080664 16086866 ECH