Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1214 ATGGACGTTAGCCGGCGACCCATTAACGCCGCCCGTTCTGGCTCTGCCGGCGAACCCCTCAAACCTCAGAAGCTCTCCCATTATGCCCCGCAGAAGTCAGCTTCGGATTCCCAGGGTTTGCCATTGATGCCGCTCTACCTCACCAATGGGATCTTCTTCAGCCTTTTCTTCTCCGTGGCTTACTTTCTCCTTCACAGGTGGCGCGAGAAGATCCGCACCTCCACTCCTCTCCATGTTGTTACGCTTTCCGAGATTGCTGCCATTCTGTCTTTCATCGCCTCCGTCATCTACCTTCTGGGTTTCTTTGGCATTGGCTTTGTCCACCCAATCAGTTCTCGTGCCTCCTCCGATGACGAGCTCGAATTGGACGACGACGACGCGGTCATTACCAAAGACGATAGCCGCAATCCCGGCCCTTGCCCTGCTGGCGTCATTGATTGCTCTATCGTCTCTTCTCCACCGCCACAGCAGCCCCAGACCCAGACGCAGAAGGTGGTGATTTCTCCCAAAGTCTTCGACAACACGCCAATTCCTCTCTCCCAGGACGACGAAGAAATCGTCAAGTCCGTGGTGTCGGGGTCGATTCCTTCGTACTCGCTCGAATCGAAGCTGGGTGATTGTCGTAGAGCGGCGGCGATTCGGAGAGAGGTGGTGCAGAGAACTACGGGAAGGTCACTCGATGGTTTGCCCACAGAAGGGTTCGATTACGACTCGATATTGGGACAGTGCTGTGAGATGCCGATCGGGTACGTGCAAATCCCTGTGGGGGTGGCGGGTCCATTGTTGCTCGATGGGGTTGAGTACACAGTGCCTATGGCCACCACGGAGGGTTGTCTAGTCGCTAGCACCAACAGAGGTTGTAAAGCCATTTACGTTTCTGGTGGAGCTTCTTCTAGTTTGCTTAGGGATGGGATGACCAGAGCTCCTGTGGTGAGGTTCTCCACGGTCAGGAGAGCTGCTCAATTGAAGTTCTTCTTGGAGGATCCTCTCAATTTTGACTCGCTTGCGGTCGTTTTCAACAAGTCAAGCAGATTTGCCAGGTTACAGAGTGTTCAGTGTGCAATGGCAGGCAAGAATGTATACATCAGATTCCGTTGCGGCACTGGGGACGCCATGGGTATGAACATGGTATCAAAAGGCGTCCAGAATGTCCTTGATTATCTTCAGGATGACTTCCCAGACATGGATGTTATTGGCATCTCTGGAAATTTCTGCTCGGACAAGAAAGCAGCAGCTGTTAACTGGATCGAAGGGCGTGGCAAGTCTGTGGTCTGTGAGGCAACAATCAAGGAGGAGGTGGTAAAGAAAGTTTTGAAGACTAGCGTGGAGGCCCTGGTGGAGCTTAACATGCTTAAAAACCTTACTGGATCCGCCATGGCTGGTGCTCTTGGCGGTTTCAATGCCCATGCAAGCAATATTGTCTCTGCTATCTACATAGCCACTGGTCAGGACCCTGCCCAGAATGTTGAGAGTTCTCACTGCATCACCATGATGGAAGCTGTGAACGACGGCAAGGACCTTCACATCTCTGTTACCATGCCTTCCATTGAGGTGGGTACAGTAGGAGGGGGTACCCAGCTCGCATCTCAGTCAGCTTGTCTTAATTTACTTGGTTGCAAGGGAGCCAGCAGAGAGTCTCCTGGTGCAAATTCTAGGCTCCTGGCCACCGTAGTAGCTGGTTCAGTCCTTGCTGGGGAGCTTTCTCTCATGTCTGCCATTGCAGCGGGGCAGCTTGTTAAGAGCCACATGAAATACAACAGATCAAGCAGGGATGTGTCGAAAGTTGTCTCCTGA 1794 0.5262 MDVSRRPINAARSGSAGEPLKPQKLSHYAPQKSASDSQGLPLMPLYLTNGIFFSLFFSVAYFLLHRWREKIRTSTPLHVVTLSEIAAILSFIASVIYLLGFFGIGFVHPISSRASSDDELELDDDDAVITKDDSRNPGPCPAGVIDCSIVSSPPPQQPQTQTQKVVISPKVFDNTPIPLSQDDEEIVKSVVSGSIPSYSLESKLGDCRRAAAIRREVVQRTTGRSLDGLPTEGFDYDSILGQCCEMPIGYVQIPVGVAGPLLLDGVEYTVPMATTEGCLVASTNRGCKAIYVSGGASSSLLRDGMTRAPVVRFSTVRRAAQLKFFLEDPLNFDSLAVVFNKSSRFARLQSVQCAMAGKNVYIRFRCGTGDAMGMNMVSKGVQNVLDYLQDDFPDMDVIGISGNFCSDKKAAAVNWIEGRGKSVVCEATIKEEVVKKVLKTSVEALVELNMLKNLTGSAMAGALGGFNAHASNIVSAIYIATGQDPAQNVESSHCITMMEAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGCKGASRESPGANSRLLATVVAGSVLAGELSLMSAIAAGQLVKSHMKYNRSSRDVSKVVS 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1214 597 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 179 253 - -
Dere09g1214 597 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 1. 363 377 IPR023076 GO:0004420
Dere09g1214 597 ProSiteProfiles Hydroxymethylglutaryl-coenzyme A reductases family profile. 183 587 IPR002202 GO:0004420|GO:0015936
Dere09g1214 597 Pfam Hydroxymethylglutaryl-coenzyme A reductase 211 587 IPR002202 GO:0004420|GO:0015936
Dere09g1214 597 MobiDBLite consensus disorder prediction 1 32 - -
Dere09g1214 597 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 407 582 - -
Dere09g1214 597 SUPERFAMILY Substrate-binding domain of HMG-CoA reductase 177 576 IPR009029 GO:0015936|GO:0016616
Dere09g1214 597 SUPERFAMILY NAD-binding domain of HMG-CoA reductase 304 420 IPR009023 -
Dere09g1214 597 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 3. 572 585 IPR023076 GO:0004420
Dere09g1214 597 Gene3D - 254 582 IPR023074 GO:0004420
Dere09g1214 597 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 361 379 IPR002202 GO:0004420|GO:0015936
Dere09g1214 597 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 270 290 IPR002202 GO:0004420|GO:0015936
Dere09g1214 597 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 243 264 IPR002202 GO:0004420|GO:0015936
Dere09g1214 597 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 452 478 IPR002202 GO:0004420|GO:0015936
Dere09g1214 597 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 401 426 IPR002202 GO:0004420|GO:0015936
Dere09g1214 597 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 506 527 IPR002202 GO:0004420|GO:0015936
Dere09g1214 597 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 304 420 - -
Dere09g1214 597 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 2. 518 525 IPR023076 GO:0004420
Dere09g1214 597 NCBIfam hydroxymethylglutaryl-CoA reductase (NADPH) 183 587 IPR004554 GO:0004420|GO:0005515|GO:0008299
Dere09g1214 597 CDD HMG-CoA_reductase_classI 184 587 IPR004554 GO:0004420|GO:0005515|GO:0008299
Dere09g1214 597 Gene3D - 304 420 IPR009023 -
Dere09g1214 597 PANTHER 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE 21 590 IPR002202 GO:0004420|GO:0015936
Dere09g1214 597 Gene3D - 179 253 IPR023282 GO:0004420
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1214 Dere-ChrDere09 16033404 16037009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1214 1 593 Lipid Metabolism Gene Families AT1G76490 69.637 0.0 843
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1214 09 16033404 16037009 Dere09g1214 09 16033404 16037009 ECH