Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1187 ATGATAATCCCAAATAGTGTTCACTCTCTTACAGTTCTTGAAAGTGTATTTCTTATTTTAAAGACTGAGTGGGAATGGTTAGTGTCTGCTTGCGATTTTGTTTTGGAAGAGTTCAATTCAGAAGTTCTTCGATCTTGTTTCCGGAATGCAAAAGTCATGGTTTGCATATTTTGGAGGTTGTTAGCTGCACTAATATTAGAAATGCCTTCTGATAGTTTCATGAATGATATTGATAAGTGGGTCAACTGGATTAAGGATTTGTTTGTATTTTTTACTGCCTCACAGTTCAAGCAAGCTTTTTGTGAATACCTACGCTACCTAGTGGCTCAATGCAAGATATCACCTTCTACCTTCTTATCTAAGTTTTTCACAGAGGAAGGTGTTCTTGTGCCTGTCCAAGTTGAAAGTCTCCAGTGCTTTGCATTTCTTTGTATCTTGTCACAAGAAAGATGTCAATTTGAACTTTTAGAAGAATTTCCTTCAGTTCTTATTCCATTCGCTAGTGATAAACAGGATACAAGGATTGCACCTATAAATGGCACTGATGGGAGAGAGCGAATCATTCTTGCATGCCTTGAGAAACACCGGCAATTACGTGGCACCCTGTCCACGGGTGATACTGCTAAGGACGGACGAAGAAAATCCTCATGCCGGCCTCTGTCTGAGGGCGTTCGTAGTTCATTACGTTCTGGCATTTTCTTGTTCGACTTGACGAGGGTCGTGGAAGAACTGGTTTTCAATAGCCTGGATGCGGGTGCAACGAAGGTGTCAGTCTTTGTTAGTATTGGGAGCTGTTATGTAAAAGTAGTGGATGATGGAGCTGGTATTACTCGAGATGGATTGGTGTTGGTTGGAGAAAGATACGCAGCAACATCAAAGTTACTTAGTTTGGCTGATCTGAATGCCACAAGTGGAAACTTTGGTTTTCGGGGGGAAGCTTTAGCTTCCATTTCAGAGATCTCGTTGTTGGAAATTTTGACAAGAACTTATGGAAGGGCAAATGGATATCACAAAGTATTGAAGGGGTGCAAGTGTCTATATCTTGGTATAGACGATGATAGAAAGGAAGTGGGAACTACAGTTGTTGTCCGTGATTTATTTTACAACCAACCAGTTCGGAGGCAATATATGCAGTCCAGCCAAAAGAAGGTGCTGCAATCAGTCAAGAAATGTATGCTGCGGCTTGCACTTGTGCGTCCAAATATTTTGTTCAAAGTTGTTGATATTGAAAGTGAAGATGAACTTCTCTGCACACATTCTTCTTCTTCGCCCTTGTCACTTCTAACCAGTGGCTTTGGTGTGGAGGTCTCAAGCTCCCTTCGTGAATTACAAGTTCAGGATGATATCATAAAGCTTTCAGGATACATATCTGACCCCTGCAATAGTTTTACCCTGAAGAATTATTTGATAACTGTCTTCCCTTCCTCTGCCCCCTCCAATCCTTGGTGTGGTGCTGTGTGCTCTTTGCAGGCCTTACAGTTTGAACATCTGGACTCCTGGAATGCTGATGACAGGTTCCAGAACAAGAAGAGAAGTAGGTCTCAAGCATATCCAGCTTATATCTTGAATTTGAGTTGCCCGCGACTCCAGCAACACTGCTTAGAATTTGACACCTTTCCCCACCCACTTTTTAAGGATTGGGCTTCTATACTGAACTTCATTGAGAAGGCTGTTAAACAATTCTGGGAAGAGAATATAACTCACGGAGAGTCCTCTGAATATGCTGCTTATGTGGTACAAGCAGATCAACAGTGCAAGGCAGTTGACAATGTCATTTCAGCTGAAAGAGACAAGCTAACTGAAGATGACCAGCACCTATCCACTGAAGAAGATATTAGATCTTCTCTTGGTTATTTGCACAGGGACACTGCAAAGTTCAAAGAAAAACAAAAGAAGAGAGACTTTCTAGGTCAGACTGGTTACTCTAGCTTTCTGATGGATGGATCATATACCAAATGTGAGGCCACTGTGACTAAAAATCATAATGATCTGTGGCTGTGTGATAACAATTGTCCATCTGGAAGAGACTATTTTTTGGATGGTAAATATGCTGCTGCGGAAATCTTCAATGATGATGTGTCTTTTGATGCACCCAGCTCGTCAAAAGGAAATAAATTCCTTGAAGATGATGATGATGTGTTCAGTGAAACATTTGAAGGTGCTTTCTGTTATGACTATCACAAGCTCTGTAGTGACATAGATATCAATGGGGATTTTCAAAAGCCTTTTCTGAAGAGCTGCTCTATTCAAGGAGGTACTATGCATGAGAAGGCTTTGTTTGCAAATGATGAACATGAGTTCCAAATTGACGGCTTCAGCAATGGACAAGATCTGGGTGAGTGTTGTGGCAGTGTTGAGGACTTAGGTGCCCATCCCTGTCCTGAAGTTGTAGAAATAATTAACACATACAGAGATTCTGCTTTTCTCTCAAGAGCTTCTGCCGTAGAAAAATGTTTTTCTTCAGATTCATGCTATTCAGCAACACAAATGGGATGCTCTGGGTCTGATCATGAGTTATTGACATCAGAATGGTACCCTATATACAAAACACCCTTATCTGAAGCCACTACATGGGTTGTTGATCATATGACCTGCACTGGTCTTGATGATCTTGGAGGAATATCCAGATACTATAAAGGGGATGATTATACCAAAATTCTAGACGATGAAGAAAATAGATGCAACTTTAGTTGCAATATCTCAAATAGCTTCAATTCAGATCAGTGCATTAGAAGTTTTGGAAACGCTGGACTGTATTTTGATGGTCCCAATGATTGTAATGAAATAAATTTTACCAAATGGTCAGATTCTAGGCTAGTTGACTGGCCTGATTGTGATGATATATATTCCAACAAATGGTCAGATATTTTAAATGATAAGTCAGATTGCTTGTGTCCTGAGTCATGTGGTGAAAACTACAAGAGACTTAGCAAGAACAGAGTCAGAAGAGATCATGTTAGACATCCAGATTTGAAAAAGAATCATGAAAGATCTAGAAGAAGCTTTTCAGCCCCTCCCTTTTATAGAAGCAAAAGAAAGTTTTATTCTTTAAATCAACCCTTAACAACTATGGCCCAAAGACCTGCTGGCCAAACCTTAAACTGTGCTTTAAAGAATAGAGATTTGGCAGAAGCTGGTGAATCTGAACGTCCTCAACAATCTTCTGGTGCACTTCACCCAAGCCCCGAGGAGCATTCATTGCTTGAAAATGATTCCAATATGAAACAGAGGACAGATACTGTGGGAGATACGCAGCATCTTAATAACAGGAGAGAGTTTAACAGGTTTCAAAGTAATAGTCAAAGCAATGCAACATTTAAAGAATTAATTTCAAGGAAAGTGGAAGATTCCATAGATTACAAGACAAAGTGGCGGACCTACTCGCCTCAAGTTCCAAAGGGGGACAGATCACTTGATTTTCAAAGTCAAAATAATATACTTGACATATCTTCTGGAATCTTGCATCTTGCTGGTGATTCATTAGTACCTGAAACTATGAGTAAGAAATGCCTTGAGGATGCGAGAGTTCTTCATCAGGTAGATAAGAAATTCATACCAGTTGTGGCTGGCAGAATCCTTGCTGTTATTGATCAGCATGCCGCTGATGAAAGAATTAGATTGGAAGAATTACGTCAAAAGGTTTTATCAGGAGAAGCGAAGACAATAAACTATCTAGATGCTGAACAGGAACTGGTGCTGCCTGAGATTGGCTATCAACTACTGTACAGCTATTCTGAACAGGTTAAAGGTTGGGGATGGATCTGCAACATTCATGCTCTAGATTTAAAATCCTTTAAGCAGAATTTGGATATTCTCAACAGGCGGCCAGTTGTTGTCACACTTGTTGCGGTACCCTGCATTTTAGGTGTCAACCTAAATGATGTTGATCTTATGGAATTTCTTCAGCAGCTTGCTGACACGGATGGATCATCAACAATGCCACCCTGTGTTATACGAGTTCTAAATTTGAAGGCATGCAGAGGTGCAATTATGTTTGGAGACTCGTTGCTACCATCCGAATGTTCCCTCATTGTTGAAGAGCTAAAGCATACATCCCTCTGTTTCCAATGTGCTCATGGGCGACCAACTACTGTTCCTCTTGTCAACTTGGAGGCGCTGCATAATCAGATAGCCAAGCTTGGACCAATGAATGATTGCTCCAATGATCAGTGGCATGGATTACGAAGACATAGAATAAGTGTTGAACGTGCAGCACAACGTTTATGTTCCTCCAGAGAATAG 4242 0.4064 MIIPNSVHSLTVLESVFLILKTEWEWLVSACDFVLEEFNSEVLRSCFRNAKVMVCIFWRLLAALILEMPSDSFMNDIDKWVNWIKDLFVFFTASQFKQAFCEYLRYLVAQCKISPSTFLSKFFTEEGVLVPVQVESLQCFAFLCILSQERCQFELLEEFPSVLIPFASDKQDTRIAPINGTDGRERIILACLEKHRQLRGTLSTGDTAKDGRRKSSCRPLSEGVRSSLRSGIFLFDLTRVVEELVFNSLDAGATKVSVFVSIGSCYVKVVDDGAGITRDGLVLVGERYAATSKLLSLADLNATSGNFGFRGEALASISEISLLEILTRTYGRANGYHKVLKGCKCLYLGIDDDRKEVGTTVVVRDLFYNQPVRRQYMQSSQKKVLQSVKKCMLRLALVRPNILFKVVDIESEDELLCTHSSSSPLSLLTSGFGVEVSSSLRELQVQDDIIKLSGYISDPCNSFTLKNYLITVFPSSAPSNPWCGAVCSLQALQFEHLDSWNADDRFQNKKRSRSQAYPAYILNLSCPRLQQHCLEFDTFPHPLFKDWASILNFIEKAVKQFWEENITHGESSEYAAYVVQADQQCKAVDNVISAERDKLTEDDQHLSTEEDIRSSLGYLHRDTAKFKEKQKKRDFLGQTGYSSFLMDGSYTKCEATVTKNHNDLWLCDNNCPSGRDYFLDGKYAAAEIFNDDVSFDAPSSSKGNKFLEDDDDVFSETFEGAFCYDYHKLCSDIDINGDFQKPFLKSCSIQGGTMHEKALFANDEHEFQIDGFSNGQDLGECCGSVEDLGAHPCPEVVEIINTYRDSAFLSRASAVEKCFSSDSCYSATQMGCSGSDHELLTSEWYPIYKTPLSEATTWVVDHMTCTGLDDLGGISRYYKGDDYTKILDDEENRCNFSCNISNSFNSDQCIRSFGNAGLYFDGPNDCNEINFTKWSDSRLVDWPDCDDIYSNKWSDILNDKSDCLCPESCGENYKRLSKNRVRRDHVRHPDLKKNHERSRRSFSAPPFYRSKRKFYSLNQPLTTMAQRPAGQTLNCALKNRDLAEAGESERPQQSSGALHPSPEEHSLLENDSNMKQRTDTVGDTQHLNNRREFNRFQSNSQSNATFKELISRKVEDSIDYKTKWRTYSPQVPKGDRSLDFQSQNNILDISSGILHLAGDSLVPETMSKKCLEDARVLHQVDKKFIPVVAGRILAVIDQHAADERIRLEELRQKVLSGEAKTINYLDAEQELVLPEIGYQLLYSYSEQVKGWGWICNIHALDLKSFKQNLDILNRRPVVVTLVAVPCILGVNLNDVDLMEFLQQLADTDGSSTMPPCVIRVLNLKACRGAIMFGDSLLPSECSLIVEELKHTSLCFQCAHGRPTTVPLVNLEALHNQIAKLGPMNDCSNDQWHGLRRHRISVERAAQRLCSSRE 1413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1187 1413 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 235 414 IPR036890 -
Dere09g1187 1413 MobiDBLite consensus disorder prediction 981 1003 - -
Dere09g1187 1413 Gene3D - 1319 1379 IPR042120 -
Dere09g1187 1413 Gene3D - 1171 1248 IPR042120 -
Dere09g1187 1413 FunFam DNA mismatch repair endonuclease MutL 215 427 - -
Dere09g1187 1413 SMART MutL_C_2 1176 1336 IPR014790 GO:0005524|GO:0006298
Dere09g1187 1413 Pfam MutL C terminal dimerisation domain 1175 1336 IPR014790 GO:0005524|GO:0006298
Dere09g1187 1413 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 308 314 IPR014762 -
Dere09g1187 1413 Gene3D - 216 422 IPR036890 -
Dere09g1187 1413 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 238 333 - -
Dere09g1187 1413 SUPERFAMILY DNA mismatch repair protein MutL 1174 1367 IPR037198 -
Dere09g1187 1413 MobiDBLite consensus disorder prediction 1044 1091 - -
Dere09g1187 1413 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 218 1372 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1187 Dere-ChrDere09 15629167 15641943 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1187 09 15629167 15641943 Dere09g1187 09 15629167 15641943 ECH