Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1184 ATGTTCGTCAAGAAGTTGGTCGAGAAAGCTTCCATCAAGAAGCCTGGTGGAAATTCAGATGGGTTAAAAGCCAGCGATGTAGACACACGTTTGGTTTTTCATTATGGAGTCCCATCCAATGGTACCAAGTTAGCTTATGACAACATTCAGAAGATTCTTGCACTTTCTACAAAGGATGGCAGAATTAAACTATATGGGAAAGATAACACTCAAGACATTCTCCAATCAACCGAGCCAGCGCCTAGCAAGTTTATACAGTTCATCCAGAATCAAGGCATCCTTATAAATGTCACTTTCAACAACCATATTGAGGTTTGGGACATCGACAAGAAGCAATTGTCTGATGTGTGCACTGTTAAAGAAGAAATTACTTCCTTTGCAGTCATTCAACACAGCTTCTATTTGTATATTGGAGATTCTGTTGGTAATATTTCGATTTTGAAGCTCGATCAAGAACCATGGCATATAGTACGGATGAAATACACCATACCTCTCTTAGCTTCTTATGGGAATACAACTGAAGTGTCTGATGATACTGCTGTGACACATATACTGCCTCAACCAGCAGCTGAAAGTAAGAGGGTTCTCATAGTTTTTAGAAATGGCCAAATAATATTATGGGATATTCGTGAAAGCAAATCTGTATTCAGAACTGGTGGAAACATATTACAACCATCTCATAATGAAACCAAGAAAGCTACTTCTGCATGTTGGGCGTGTCCATTTGGAAGTAAAGTGGTTGTAGGGTACAACAATGGAGAGCTTTTTATTTGGAATATCCCTTCTCAAACAATAGGAAATGATTCAGATAATACTAGTCAAAATACTCCTATGTTCAAGCTTAACGTAGGATATAAATCAGATAAAATTCCCATAGGCTCTGTAAAATGGGTTTATGCTGAAGGAAAGGCAAGTCGACTATATGTCTTTGGAACTTCTGACTTTACATCTCCAAACTTGTTGCAGGTAGTGTTACTGACTGAGAACACTGAGTCTCGCACAATTAAGCTAGGCCTTCATTTGGCTGAATGTTGTATTGACATGGAAATCATATCAACTTCAAGTGAGCAAAGCAAGCATAAACAGGATTCTTTCATTTTGCTTGGGAAATCAGGCCATATATACCTGTACGATGATAGTTTGATCGAAAGGTATCTTCTACAATGCCAGTCTAAGTCCACGCCCTCATTGCCAAAGGAAGTGATTGTGAAGTTGCCACTGGCAGATTCCAGCATCACAGCAGCAAAGTTCATCTCAGACAATCCCAGTGTGCTAAATCCTAATGATGAGGATTATGTTCAGCTGTTGAAAAACTATCCACCACTTATTCCCACTGAAACAAAACACAAAGATGGGACTATTGTGAATTCTTCCAACTTCACTGGATTTTCTAAAGTTAAAAACTTGTACATAACTGGCCACAGCAATGGAGCCATAACTTTCTGGGATGCGTCATGTCCCTTTTTCATCCCAATTTTGCAGTTGAAGCAACAGAGTGAAAATGAGTTTTCTTCAAGTGGCATACCCATAACAGCATTACATTTTGATAGCGACAACCTTTTTCTTGTTTCTGGAGACCAGAGTGGAATGGTTCGCATCTTCAGATTCAAACCTGAACCTTATTCAACCAACAGCTTTATATCTCTTACTGGAAGCACAAAGAAAGGGACTGATCATATAATCCACAGTGTGAAACTTGTAAAGACTAATGGAGCTGTACTGTCCATGAACATAGATCATGGCTCAAAACATCTAGCTGTTGGTTCTGATCAAGGATATGTTTCAGTTATTGATATGGATGGCCCAACTTTGTTATATCAGAAGCATATGAAAAGTGAAATTAGCACTGGTATCATCTCTCTGCAGTTCCAAACCTGCAGTTTACACAGTTTTGAGAAAAACATATTAGCAGTTGGAACAAAGGACTCATCTGTTTTGGCGCTTGATAGTGAAACTGGTAACACATTGAGCACCAACACTGTTCATCCTAAGAAGCCATCTAGAGCTCTGCTAATGCAGGTGTTAGTTGGACAAGGAGAATCAATCAAGGGATTGGACACGAGCGAAGGGAACCAAATTGAGGATGCAACAACAAAGCAATTATGCATTTTGTTGTGTTCTGAGAAAGCTTTGTATGTCTATTCTTTACTGCATGTTGTTCAGGGCGTTAAAAAGGTGCTTCACAAGAAGAAGTTTCATTCCTCCTCCTGTTGCTGGGCATCAACATTCTACAGTCATTCTGATATTGCACTTGTACTCCTATTCACCAATGGAAAAATAGAACTAAGGTCTTTGCCAGAGTTGTCCCTGATAGTGGAGACTTCAATTAGAGGTTTCACATATTCACCTCCGAAATTACAATCATTTTCTGACAGCCAGATATGTTGTTCATCCAGAGGAGATCTTGTTTTGGTGAATGGTGACCAGGAAATTTTTGTTGCTTCATTGTTGGTCAAGAGGGATATTTTCAGGCTTTTGGACAGTGTCAGCTGTATCTACAGGAAAGAAAGGATGCTATCACAAGAAGAGGTTGTCCATGCCCCAGTCGTCCATAAGGAAAAGAAAAAGGGTATATTCAGCTCTGTTATCAAAGATTTTACTGGCAGCAAAGAAAAGCATGTGACCCTCATGGAAACAGAAGATGCAAAAGAAAGCATCCAGGAACTCTCAGTGATCTTTTCTATTGCAAATTTTCCATGTGATGCTGACAATAATGATAACCTTACCATGGATGAAAATGAACTTGAATTAAACATAGATGACATAGACCTCGAGGATCCTGGAGAAAAACGCCAAGATCAAAGTATATTGGGTGCTCTGAATAAGAAGAAATTGGCTGGCACATTTCAGGCTCTAAAAGGAAGGTTGAAAGACATGAAAGGCAACAACCAGAAAACATCAAGTAAGGAAGAGCAACAAGATGACAAAGCTGGTGCAGTTGATCAAATCAAGAAGAAATATGGGTTTTCTTCTTCCTCCAATGAAACAAGCACTGCTAAATTGGCACAAAGCAAGTTGCAGGAGAATATAAGGAAACTACAGGGTATCAACCTTCGAGCTACAGAGATGCAGGATACAGCAAGATCATTTTCATCGTTGGCAAAACAAGTGCTGCGAACCGCTGAACAGGATAGACGAAGTTGA 3144 0.3947 MFVKKLVEKASIKKPGGNSDGLKASDVDTRLVFHYGVPSNGTKLAYDNIQKILALSTKDGRIKLYGKDNTQDILQSTEPAPSKFIQFIQNQGILINVTFNNHIEVWDIDKKQLSDVCTVKEEITSFAVIQHSFYLYIGDSVGNISILKLDQEPWHIVRMKYTIPLLASYGNTTEVSDDTAVTHILPQPAAESKRVLIVFRNGQIILWDIRESKSVFRTGGNILQPSHNETKKATSACWACPFGSKVVVGYNNGELFIWNIPSQTIGNDSDNTSQNTPMFKLNVGYKSDKIPIGSVKWVYAEGKASRLYVFGTSDFTSPNLLQVVLLTENTESRTIKLGLHLAECCIDMEIISTSSEQSKHKQDSFILLGKSGHIYLYDDSLIERYLLQCQSKSTPSLPKEVIVKLPLADSSITAAKFISDNPSVLNPNDEDYVQLLKNYPPLIPTETKHKDGTIVNSSNFTGFSKVKNLYITGHSNGAITFWDASCPFFIPILQLKQQSENEFSSSGIPITALHFDSDNLFLVSGDQSGMVRIFRFKPEPYSTNSFISLTGSTKKGTDHIIHSVKLVKTNGAVLSMNIDHGSKHLAVGSDQGYVSVIDMDGPTLLYQKHMKSEISTGIISLQFQTCSLHSFEKNILAVGTKDSSVLALDSETGNTLSTNTVHPKKPSRALLMQVLVGQGESIKGLDTSEGNQIEDATTKQLCILLCSEKALYVYSLLHVVQGVKKVLHKKKFHSSSCCWASTFYSHSDIALVLLFTNGKIELRSLPELSLIVETSIRGFTYSPPKLQSFSDSQICCSSRGDLVLVNGDQEIFVASLLVKRDIFRLLDSVSCIYRKERMLSQEEVVHAPVVHKEKKKGIFSSVIKDFTGSKEKHVTLMETEDAKESIQELSVIFSIANFPCDADNNDNLTMDENELELNIDDIDLEDPGEKRQDQSILGALNKKKLAGTFQALKGRLKDMKGNNQKTSSKEEQQDDKAGAVDQIKKKYGFSSSSNETSTAKLAQSKLQENIRKLQGINLRATEMQDTARSFSSLAKQVLRTAEQDRRS 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1184 1047 CDD R-SNARE_STXBP5_6 982 1039 - -
Dere09g1184 1047 SMART WD40_4 219 259 IPR001680 GO:0005515
Dere09g1184 1047 SMART WD40_4 557 598 IPR001680 GO:0005515
Dere09g1184 1047 SMART WD40_4 398 483 IPR001680 GO:0005515
Dere09g1184 1047 SMART WD40_4 496 535 IPR001680 GO:0005515
Dere09g1184 1047 SMART WD40_4 162 208 IPR001680 GO:0005515
Dere09g1184 1047 MobiDBLite consensus disorder prediction 958 979 - -
Dere09g1184 1047 SUPERFAMILY WD40 repeat-like 44 604 IPR036322 GO:0005515
Dere09g1184 1047 MobiDBLite consensus disorder prediction 956 979 - -
Dere09g1184 1047 Gene3D - 446 768 IPR015943 GO:0005515
Dere09g1184 1047 SUPERFAMILY WD40 repeat-like 509 803 IPR036322 GO:0005515
Dere09g1184 1047 Pfam Lethal giant larvae(Lgl) like, C-terminal 717 822 IPR013905 -
Dere09g1184 1047 Coils Coil 905 925 - -
Dere09g1184 1047 FunFam Syntaxin-binding protein 5 isoform A 22 181 - -
Dere09g1184 1047 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 5 1040 - -
Dere09g1184 1047 Gene3D - 40 378 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1184 Dere-ChrDere09 15600712 15610115 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1184 09 15600712 15610115 Dere09g1184 09 15600712 15610115 ECH