Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1163 ATGGCCACAAGCGAAGGTGATATTGGTGGGGTGATGGAAAGTAATGAAGGAGATTGTTTTAAACCTGAGGAACAGTTTTCAGAAATGAATCATTACAAAAGTGGAAGCAATGGAAATCTTGTTTTGGAAAATGGCTTATCTGATGGCAACTTGGGTCCAGCTGATACTCATGATCAGCTCCTACAAATGGCTTTTGAACTTAGATTTCAGAATGATTTCTTAAAGTCTCAGTTTGAGGGCTTTAGCAGTCTAAACACTGTACATAGTGACTCTTGTCTGGAAAAAAAGGTTGGCGGCCCGGAAGACGAAAAGTCTGCAATTGTTGAAGAACTGCAGGGAAGGATACGTGCATTAAACAAAGAACTTCTGGATGAAAAACAAACAAGAGGTGCAGCTGAAGAAGCTCTGAAGCATCTTCAAACAGCATACTCAGAGGCAGATGCGAAAGCTCAAGAGCTCTCTGAAAAGCTTGCAGAAGCTGAAAAGAAGTTGGATCAAGAAATAAAAGAGCGTGAAGAGAAGTATACTGAACTTGACACAAAGTTTAACAGGCTTCACAAACGAGCAAAACAGCGCATTCAGGAGGTTCAAAAGGAAAAAGATGATCTTGAGGTCCGATTCCATGAGGTGAATGAAAAGGCTGAGCAAGCATCATCCCAGCAGTCAGCATTGCAACAAGAGTTAGAACGAACAAGGCAGCAAGCAAATGAGGCATTGAAGGCCATGGATGGGGATAGGCAACAGCTTAGAAGTGCAAATAACAAACTTCGAGATACCATTGAGGATTTGCAGCGTTCATTGCAACCAAAAGAGAGTGCCATTGAGGCATTGCAACAGTCACTTGCAGAAAAGGAGCAGATGATAGAAGATATGAGAGGTTTGCTTCAGGCAGCTGATGAAAAAAGACAAGCTGCACTGACTGAACTTTCATCTAAACATCAGAAGAATATAGAGAGTTTGGAAGCTCAACTAAATGATGCTATATCTGAGAGAAATAAGGCGGCTGAAACTATTTCCTCACTGCAGGTGCTAGTTGCAGAGAAAGAATCTAAAATTGCAGAGATGGAGGCAGCATCAACTGGGGAAGCAGCACGACTTAGAGCAGCTGTTGAAAGTGTGAAGGGGGAGCTTTCTCACCTGAAACAGGAGCATGAGAAGGAAAAGGAAAGCTGGGAGACTGCAGCTCATGCACTTAAATCGAAACTTGAAATTGCAGAGAGCAACTGCATACATGCTGAAATTGAAGTAGCAAAAATGAGAAGTCAGCTGGAATCAGAAGTATCTGCACACACCGGGATTCTCAATATGAGAGATGCAGAATTGTTAGCTGCCAAGGAAGAGATCAGCCGCCTTGAGAATGAATTTTCTTCCTACAAGGTTCGTGCTCATTCACTTCTTCAGAAGAAGGATGCAGAACTGGCTGCAGCTAAAGACTCTGACCAACTTAAAGCTCTTGAAGAAGCTTTAAAAGAGGCTGAAAATGAAGTATTATCAATAACAGAAGAAAGGGATAGAGCTCTTCAAGATCTTCAACATGCTACCAGAAATCATGAGAAAGAACTCACAGAAAGAGACACAGCCCTTGAAAATGTCAAGGAGCAGATAAGGAACTTAGAAATGAAACTTGATTCTGCTAATGCTCAGCACCTCAAAGAGAAAGAAGCATGGGGACTAAGCCTTCAAAAAGTTGAAGAAACATGGCGAATTAAATATGAGGCAATGAAGGCTGAAACCAAGGGATCTTCAGCTCACGATATGAAACTACGAAAGGAACTTGAAGAGCTCAAACAACAGTACAAAAAATTGAAGGAAGAGCATGATTCTTTTCGTGATCTAGCTGATAGAATGATTGAGGAGAAAGACAACGAAATATCTAGACTTTTGGATGATAACAATAATCTTCATCAGTCCCAGCAATCTAGCCCATTGGTGGATCAATATGATTACTATAGCACAGCCTTGCATAAAGGGGATTTACTGAATTTAAGTCCCTCATCTGCAGAACAGCAAATTCTGCTTCTGGCTAGACAACAAGCCCAGAGAGAGGAAGAGTTGGCACGATCACAACGGCATATCTTGGCTCTTCAAGAAGAAATTGAGGAACTTGAGCGTGAAAATCGTCTCCATAGCCAACAGGAAGCAATGTTAAAGACTGAGCTTCGTAACATGGAAAGGACAAAAAAGAGGGAAGGAGTAGATATGACCTACTTGAAAAATGTCATATTAAAGCTTCTTGAGACAGGTGAAGTGGAAGCACTACTACCAGTAATTGCAATGCTGCTTCAATTTAGTCCTGAAGAGATGCAGAAGTGTCAACAGGCATATCGCAACTCTACAGAAGTTCCACCGAGTCCAGGAAGTGATGCTTCAGGATCTGGCCTTTCTCTTTTCTCAAGATTCTCATTTTCATAG 2412 0.4163 MATSEGDIGGVMESNEGDCFKPEEQFSEMNHYKSGSNGNLVLENGLSDGNLGPADTHDQLLQMAFELRFQNDFLKSQFEGFSSLNTVHSDSCLEKKVGGPEDEKSAIVEELQGRIRALNKELLDEKQTRGAAEEALKHLQTAYSEADAKAQELSEKLAEAEKKLDQEIKEREEKYTELDTKFNRLHKRAKQRIQEVQKEKDDLEVRFHEVNEKAEQASSQQSALQQELERTRQQANEALKAMDGDRQQLRSANNKLRDTIEDLQRSLQPKESAIEALQQSLAEKEQMIEDMRGLLQAADEKRQAALTELSSKHQKNIESLEAQLNDAISERNKAAETISSLQVLVAEKESKIAEMEAASTGEAARLRAAVESVKGELSHLKQEHEKEKESWETAAHALKSKLEIAESNCIHAEIEVAKMRSQLESEVSAHTGILNMRDAELLAAKEEISRLENEFSSYKVRAHSLLQKKDAELAAAKDSDQLKALEEALKEAENEVLSITEERDRALQDLQHATRNHEKELTERDTALENVKEQIRNLEMKLDSANAQHLKEKEAWGLSLQKVEETWRIKYEAMKAETKGSSAHDMKLRKELEELKQQYKKLKEEHDSFRDLADRMIEEKDNEISRLLDDNNNLHQSQQSSPLVDQYDYYSTALHKGDLLNLSPSSAEQQILLLARQQAQREEELARSQRHILALQEEIEELERENRLHSQQEAMLKTELRNMERTKKREGVDMTYLKNVILKLLETGEVEALLPVIAMLLQFSPEEMQKCQQAYRNSTEVPPSPGSDASGSGLSLFSRFSFS 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1163 803 MobiDBLite consensus disorder prediction 773 794 - -
Dere09g1163 803 Coils Coil 303 358 - -
Dere09g1163 803 Coils Coil 434 461 - -
Dere09g1163 803 Pfam GRIP domain 731 770 IPR000237 -
Dere09g1163 803 Coils Coil 521 555 - -
Dere09g1163 803 ProSiteProfiles GRIP domain profile. 727 774 IPR000237 -
Dere09g1163 803 Gene3D - 101 270 - -
Dere09g1163 803 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 115 790 - -
Dere09g1163 803 Coils Coil 101 181 - -
Dere09g1163 803 Coils Coil 585 637 - -
Dere09g1163 803 Coils Coil 468 509 - -
Dere09g1163 803 Coils Coil 186 301 - -
Dere09g1163 803 Coils Coil 685 719 - -
Dere09g1163 803 SMART 1grip 730 774 IPR000237 -
Dere09g1163 803 Coils Coil 363 422 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1163 09 15341029 15351779 Dere09g1163 09 15341029 15351779 ECH