Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1068 ATGCTTTTAGAACCATCCTTATTAAGGACAATATGTAATCAAACGGGCCTTGATAAACGAGACATCGTAGCTTTGCGTGGAGGCTACATGAGATTGGCTCAGTCACACGGAGACCGATCAGGCACTGAACACCAATGGGAAACGAACCCTTTGACATTTGACAACTCGTATCTTGGGGACCTAGTGATCTCGTCGAATAATATTGAGGAGTCTTCGAATTCTCTTGACATGGTAGACAAGGCTATGTTGGATGATTCTGAGTTCCGACACTATGTGTTATTGTACGCACTGGATGAGGATGCTTTCTTTACCGACTATGCAACTGCGCACAAGAAAGTCTCACAGCTAGGCATTCCCATTTTGCCTGTCGTTGCTTTGAGTCCTTATTCCCATATTGGAATTCCTGCTGGTGCATCTATAGTCATATCCTGCAAAAACATCCCTACCCTGCCTTCCTCCTCCCCTTCCTCTTCCAAAAACAGATCCTTGCGTTTCCCAACTTTGAAAATGGCGCCAACTGTTAACGATGACTATCTCAAGGAAATCGAGAAGGCTCGTGGCGACCTTCGCGCTCTATTGTTCAAAAGTGACCGTGCTCATCACATGCTTCGCTTGGCGTTCTATGACGCTGGAACTTACGATCCTGAAAACAAGAGAACGGTAGGTCCTAATGGTTCAACAAAATATATAAAAGATCAATCAGTTTTGAAAAGTGCCGTGGATCTTTGCGAGTCAGTGAAGAAGGATAAATTATTAATCACATATGCGGACCTTTACCAGCTTGCTGGTGTTGTTGCAGTTGAGATCACTGGGGGCCCAACAATAGTATTTAATCCCGGCAGAGAGGACTCAAAACAATCTCCAGAAAAACTAGAGCGGCTTCCAATTGATGACGAAGGAACAGAGCCGAAGACAATAAGGGATCTCATTAAACGCTTGGATCTTAAAGAAAATGACTTCGTGGCTCTGTTTGGAGGCCTCCATCGATGGGACGCCAAAGATCAAGAGACAAGGGAGCGTTTTGACAACTCGTATTTTAAGGAACTAAAGAAGGAGGACCAGAACATATCGAATAAAGCTCTCGTGAAGGATTCAGGCTTCTTCGAGATTGTGAAGCAGTACGCAGAGGAACCGGATAAATTCTTTAAAGATTATGCAGCTGCGCACTATAAATTGTCACAGCTAGGCTTCACTCCGCCTGAAGCAAAATCTGCCCAAGGTGACAAAGGAACTGCTGAGTCAGCATCTTCAGATCTCGAGAAATTAAGGGATATCATTACACGCATGGGTCTTGAAGAAAAGGACATAGTGGCTCTGTCTGTAGGCCTTAATCGATGGGGCACCGAAGGCGAATGGACAAGGGAGCGTTTTAACAACTCGTATTTTAAGGACCTAATTGAGAAGAAGAACGCATTGCCTAGTGCTTTCGTGAAGGATGCAAATTTCGTCAAGATTGTGGAGCAGTACGCTAAGAACTCGGATGAATTCTTTAAAGATTACGCAGCTGCGCAACAGAAATTGTCAAATCTAGGCTTCATTTCAGCTGAAGTAAAATCGGTACAGGGTGGTAAAGTAACTGCTGAGTCAGCATCTTCCTCGTCTAAGTCTGCTACATGGAGTCGTGTCAGATTGGCCCAGGGTATAGGAATGGCGATTGCCACAACTGTGGTGATCCTGGGTTACCTCTTGAGCAGAAGAAATAAGTGA 1707 0.4464 MLLEPSLLRTICNQTGLDKRDIVALRGGYMRLAQSHGDRSGTEHQWETNPLTFDNSYLGDLVISSNNIEESSNSLDMVDKAMLDDSEFRHYVLLYALDEDAFFTDYATAHKKVSQLGIPILPVVALSPYSHIGIPAGASIVISCKNIPTLPSSSPSSSKNRSLRFPTLKMAPTVNDDYLKEIEKARGDLRALLFKSDRAHHMLRLAFYDAGTYDPENKRTVGPNGSTKYIKDQSVLKSAVDLCESVKKDKLLITYADLYQLAGVVAVEITGGPTIVFNPGREDSKQSPEKLERLPIDDEGTEPKTIRDLIKRLDLKENDFVALFGGLHRWDAKDQETRERFDNSYFKELKKEDQNISNKALVKDSGFFEIVKQYAEEPDKFFKDYAAAHYKLSQLGFTPPEAKSAQGDKGTAESASSDLEKLRDIITRMGLEEKDIVALSVGLNRWGTEGEWTRERFNNSYFKDLIEKKNALPSAFVKDANFVKIVEQYAKNSDEFFKDYAAAQQKLSNLGFISAEVKSVQGGKVTAESASSSSKSATWSRVRLAQGIGMAIATTVVILGYLLSRRNK 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1068 568 SUPERFAMILY Heme-dependent peroxidases 414 513 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere09g1068 568 SUPERFAMILY Heme-dependent peroxidases 170 399 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere09g1068 568 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 8 118 IPR044831 GO:0004601|GO:0034599
Dere09g1068 568 Pfam Peroxidase 188 376 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1068 568 SUPERFAMILY Heme-dependent peroxidases 7 129 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere09g1068 568 Gene3D Peroxidase, domain 2 295 389 - -
Dere09g1068 568 Gene3D Peroxidase, domain 2 7 110 - -
Dere09g1068 568 Gene3D Peroxidase, domain 2 413 504 - -
Dere09g1068 568 Gene3D - 407 511 - -
Dere09g1068 568 PRINTS Plant ascorbate peroxidase signature 178 198 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere09g1068 568 PRINTS Plant ascorbate peroxidase signature 252 270 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere09g1068 568 PRINTS Plant ascorbate peroxidase signature 373 397 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere09g1068 568 PRINTS Plant ascorbate peroxidase signature 271 283 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere09g1068 568 PRINTS Plant ascorbate peroxidase signature 199 214 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere09g1068 568 ProSiteProfiles Plant heme peroxidase family profile. 186 533 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1068 568 Gene3D - 186 396 - -
Dere09g1068 568 PRINTS Haem peroxidase superfamily signature 199 213 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1068 568 PRINTS Haem peroxidase superfamily signature 253 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1068 568 PRINTS Haem peroxidase superfamily signature 334 349 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1068 568 PRINTS Haem peroxidase superfamily signature 271 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1068 Dere-ChrDere09 13564486 13571633 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1068 09 13564486 13571633 Dere09g1068 09 13564486 13571633 ECH