Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1046 ATGGCGGACTCAGTGAAGCAAATCTTAGCAAAACCGATCCAGCTGGCAGACCAAGTTACCAAAGCAGCCGATGAGGCTAGCTCTTCCTTCAGGCAGGAATGCGTAGAGCTCAAATACAAAACCGAGAGACTCGCGGGGCTTCTCCGGCAGGCGGCGAGAGCCAGCTCGGATCTCTACGAACGCCCTACGCGGCGCATCATCGAAGAAACCGAACAGGTCCTTGATAAAGCCCTCTCGTTGATTCTCAAATGCCGGGCCAATGGCCTCATGAAGCGCGTGTTCACCATCATCCCCGCCGCCGCGTTTCGCAAGATGTCTTCCCAACTTGAGAACTCAATCGGTGACGTATCCTGGCTCCTTCGTGTGTCCGCTCCGACGGAGGATCGCGGCGACGAGTATCTGGGTCTTCCTCCGATCGCAGCAAACGAACCGAATCTTTATCTCATATGGGAGCAAGTCGCGATTCTTTGCACGGGTTCTCTGGAGGAGCGATCTGATGCGGCGGCTTCGCTGGTGTCACTTGCTCGGGACAACGATCGGTACGGGAAGTTGATAATCGAGGAAGGTGGGGTTGGACCATTGTTGAAATTGCTCAAAGAGGGTAAGATGGAAGGCCAAGAGAATGCTGCGAGAGCAATTGGGCTTCTGGGTCGTGACCCCGAGAGCGTAGAGCACCTGATCCACGCCGGTAGATGCTCTGTGTTTGCGAAAATCCTCAAGGAAGGGCCGATGAAAGTGCAAGCTGTGGTGGCCTGGGCTGTGTCGGAGCTTGCAGCGAATTACCCCAAATGCCAAGATCTTTTTGCCCAGCACAATATAATCCGATTGCTCGTCAGCCATCTTGCTTTCGAAACTGTTCAGGAACACAGTAAGTATGCCATTGATCGCCTCAAACCCACATCAATCCATGCGGTTGTGATGGCAAGTAATAACTCTAACTCTGATACCGATAACCAAAAGGCCAATGAAGACGATGAAAAGCAGATTAAGAGCCGTATGCCACATCCACTGGGAAATGGAACAGCAGCTCAGATGCATAAAGTTGTTACAAGTACTATGGCGATGAATGCTGCTTCCAAGCAGTCTAATCAAGAAAATGGAGGAAATCAGAACACTCAAGCCAGTCAACCCAAGAGCAATGGTCTTAGTAATGGGAAGCAGACCCATCAATCGCATCACCAGCAAAGCTATTCACATTCTGGAATTAACATGAAGGGAAGGGAACTAGAAGACCCCGAGACTAAGGCCAACATGAAAGCAATGGCAGCAAGAGCACTGTGGCACCTAGCCAAGGGTAACTCTCCCATATGTCGTAGCATCACAGAATCCAGGGCTCTACTGTGCTTTGCAGTACTCCTTGAGAAAGGGCGCGAAGATGTGCAGTACAATTCTGCCATGGCAGTGATGGAGATTACTGCAGTGGCAGAGAAAGATGCGGACCTGAGAAGATCTGCATTCAAGCCTAACTCACCTGCTTGCAAAGCAGTTGTTGATCAAGTGCTTAATATCATAGAGAAGGCAGATTCAGACCTGTTAATTCCTTGCATGAAGGCTATCGGGAATTTAGCAAGGACATTCAGAGCAACAGAGACAAGGATGATTGCTCCCTTGGTGCGACTTCTGGATGAACGAGATGCTGAGGTTTCAAGCGAGGCATGTATAGCCCTCACAAAATTTGCCTGCACGGACAACTACCTTCACCTGGATCACTCCAAGGCGATTATAAGCGCAGGTGGAGCAAAACACTTGATTCAGCTTGTTTATTTTGGAGAACAGATCGTTCAGATTTCAGCATTAGTTTTGCTCTGCTACATTGCACTGCATGTCCCAGACAGTGAAGAACTTGCCAAAGCTGAGGTGCAGGTGCTCTCGGTGCTCGAATGGGCATCCAAGCAGTCCTCCATGACGCAGGATGAAACAATCGAGGCGTTGTTGCAAGAAGCCAAGAGTAGGTTGGAGCTTTACCAGTCTAGAGGTTCAAGAGGATTCCATTGA 1995 0.4997 MADSVKQILAKPIQLADQVTKAADEASSSFRQECVELKYKTERLAGLLRQAARASSDLYERPTRRIIEETEQVLDKALSLILKCRANGLMKRVFTIIPAAAFRKMSSQLENSIGDVSWLLRVSAPTEDRGDEYLGLPPIAANEPNLYLIWEQVAILCTGSLEERSDAAASLVSLARDNDRYGKLIIEEGGVGPLLKLLKEGKMEGQENAARAIGLLGRDPESVEHLIHAGRCSVFAKILKEGPMKVQAVVAWAVSELAANYPKCQDLFAQHNIIRLLVSHLAFETVQEHSKYAIDRLKPTSIHAVVMASNNSNSDTDNQKANEDDEKQIKSRMPHPLGNGTAAQMHKVVTSTMAMNAASKQSNQENGGNQNTQASQPKSNGLSNGKQTHQSHHQQSYSHSGINMKGRELEDPETKANMKAMAARALWHLAKGNSPICRSITESRALLCFAVLLEKGREDVQYNSAMAVMEITAVAEKDADLRRSAFKPNSPACKAVVDQVLNIIEKADSDLLIPCMKAIGNLARTFRATETRMIAPLVRLLDERDAEVSSEACIALTKFACTDNYLHLDHSKAIISAGGAKHLIQLVYFGEQIVQISALVLLCYIALHVPDSEELAKAEVQVLSVLEWASKQSSMTQDETIEALLQEAKSRLELYQSRGSRGFH 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1046 664 SMART arm_5 219 259 IPR000225 GO:0005515
Dere09g1046 664 SMART arm_5 521 561 IPR000225 GO:0005515
Dere09g1046 664 SMART arm_5 567 607 IPR000225 GO:0005515
Dere09g1046 664 SMART arm_5 177 218 IPR000225 GO:0005515
Dere09g1046 664 SMART arm_5 433 473 IPR000225 GO:0005515
Dere09g1046 664 Gene3D - 407 487 IPR011989 -
Dere09g1046 664 Gene3D - 488 646 IPR011989 -
Dere09g1046 664 Pfam Armadillo/beta-catenin-like repeat 184 215 IPR000225 GO:0005515
Dere09g1046 664 SUPERFAMILY ARM repeat 155 626 IPR016024 -
Dere09g1046 664 MobiDBLite consensus disorder prediction 359 402 - -
Dere09g1046 664 Gene3D - 2 122 IPR036537 GO:0007166
Dere09g1046 664 FunFam Armadillo repeat only 2 151 320 - -
Dere09g1046 664 Gene3D - 151 325 IPR011989 -
Dere09g1046 664 MobiDBLite consensus disorder prediction 309 340 - -
Dere09g1046 664 FunFam Armadillo repeat only 2 393 652 - -
Dere09g1046 664 MobiDBLite consensus disorder prediction 318 332 - -
Dere09g1046 664 FunFam Armadillo repeat only 4 2 122 - -
Dere09g1046 664 MobiDBLite consensus disorder prediction 359 415 - -
Dere09g1046 664 PANTHER ARMADILLO REPEAT ONLY 4 1 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1046 Dere-ChrDere09 13366462 13368456 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1046 09 13366462 13368456 Dere09g1046 09 13366462 13368456 ECH