Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0923 ATGGTTGCAGCAAGATTATCACCGTGCGTAGCCATGGCTGCAGCGGTGGCTGCCATGTCCACGCTCTCCAACAAGGCTCACGCTGAATCCTCCTTTCGGTTCCCTCTTTTCTCTTCATCATCGTCTAATTCAGCTTCCCAGGCAGACCAGACTTCTGATACTAGGTCAGAATCTCAAGCTGCCGATGAACCAAAAAAGTCAGGTTTTGATCCGGAATCGTTAGAAAGAGGTGCAAAAGCTCTCCGCGAAATCAATAGTTCTCCCTATGCGAAACAGGTGTTTGATTTAATGAGAAAGCAGGAACAAACTCGCCTTGCTGAGTTAGATGCTGAGAAAGTTCATTATGAAGTAATTCAGTCTCAAGCTGACATTGAAAGGCAGAGGAAAATGGCTGAAGAACAACGGAATCTAATACAGGAGCAAGCACAGAGGCAGGCCCAGGTGCTACGATATGAAGATGAATTGGCAAGAAAAAGAATGCAGACAGATCATGAAGCACAGAGGCGACATAATGTTGAATTGGTGAAGATGCAAGAGGAGTCTTCTGTTAGAAAAGAACAGGCAAGGCGGGCTACTGAAGAACAGATTCAAGCCCAGCAGCGTCAAACTGAGAGAGAGAGAGCTGAAATAGAAAGGGAAACCATTAGAGTTAAGGCAATGGCAGAGGCAGAGGGCCGAGCCCATGAAGCAAAACTCACAGAGGAGCATAAAAGGAGAATGCTTATAGAACGGATGCAGGGTGAAAGAGACAAATGGCTTGCTGCAATTAACACAACTTTTAGTCATATCGAAGGTGGTTTAAGGGCCTTACTGACTGATAGGGACAAATTGCTTATGACTGTTGGAGGAGCCACAGCGTTAGCTGCAGGAGTATATACAACTAGAGAAGGTGCTAAAGTGACATGGGGCTATATTAATCGGATTTTAGGGCAGCCGTCATTGATCCGGGAATCATCCATTGCAAAGTTTCCGGGGTCAAGGATCATATCTCAAGCCAAAAACAAAGTTTTAAGTTATGGTACTATGGCCAAGGCTGAAAAAACTTCTGAGAGTCAAAATGGCCTTGGAAATGTAGTACTCCATCCGTCATTGCAGAAAAGAATAGAGCATCTTGCACGGGCGACATCAAATACCAAGGCCCACCAGGCACCATTCCGTAACATGCTTTTTTATGGACCTCCTGGGACTGGTAAAACCATGGTTGCAAGGGAAATAGCTAGAAAATCGGGTTTAGATTATGCCATGATGACTGGAGGAGATGTTGCTCCCCTGGGTCCACAGGCTGTTACCAAAATCCATGAGATATTTGATTGGGCCAAAAAATCTAGAAAGGGCTTACTGCTTTTTATTGATGAGGCAGATGCTTTCCTTTGCGAGCGCAACAGCTCACATATGAGCGAAGCTCAACGAAGTGCTCTAAACGCATTACTGTTCAGAACAGGTGATCAGTCAAGAGACATAGTACTTGTCCTTGCCACAAACAGACCGGGTGATCTTGACAGCGCAGTTACTGACCGCATTGATGAAGTGATTGAATTCCCACTTCCTGGAGAGGAAGAACGTTTCAAATTATTGAAGCTCTATTTGAACAAATACCTCAGTGAAGACAATGGCAGCTCATCCAAGCGGGGCTTCTTACTCAGGAAGCAACCCCAAAAAATTACAATGAAAGATATATCTGAGAATGTGCTGAGAGAGGCTGCGAAGAAGACGGAGGGTTTCTCTGGCCGTGAGATAGCGAAACTCATGGCTAGCGTCCAAGCAGCTGTCTATGGACGTCCAGACTGCACTCTGGATTCTCAGTTGTTCAGAGAAATAGTAGATTACAAGGTTGGGGAGCATCATCAACGAATAAAACTGTCAGCTGAAGGTGGTCTGCCTGACAAAATATAG 1893 0.4527 MVAARLSPCVAMAAAVAAMSTLSNKAHAESSFRFPLFSSSSSNSASQADQTSDTRSESQAADEPKKSGFDPESLERGAKALREINSSPYAKQVFDLMRKQEQTRLAELDAEKVHYEVIQSQADIERQRKMAEEQRNLIQEQAQRQAQVLRYEDELARKRMQTDHEAQRRHNVELVKMQEESSVRKEQARRATEEQIQAQQRQTERERAEIERETIRVKAMAEAEGRAHEAKLTEEHKRRMLIERMQGERDKWLAAINTTFSHIEGGLRALLTDRDKLLMTVGGATALAAGVYTTREGAKVTWGYINRILGQPSLIRESSIAKFPGSRIISQAKNKVLSYGTMAKAEKTSESQNGLGNVVLHPSLQKRIEHLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGPQAVTKIHEIFDWAKKSRKGLLLFIDEADAFLCERNSSHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEEERFKLLKLYLNKYLSEDNGSSSKRGFLLRKQPQKITMKDISENVLREAAKKTEGFSGREIAKLMASVQAAVYGRPDCTLDSQLFREIVDYKVGEHHQRIKLSAEGGLPDKI 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0923 630 Gene3D - 330 535 IPR027417 -
Dere09g0923 630 MobiDBLite consensus disorder prediction 160 192 - -
Dere09g0923 630 MobiDBLite consensus disorder prediction 38 55 - -
Dere09g0923 630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 609 IPR027417 -
Dere09g0923 630 ProSitePatterns AAA-protein family signature. 487 506 IPR003960 GO:0005524|GO:0016887
Dere09g0923 630 Coils Coil 121 144 - -
Dere09g0923 630 Pfam ATPase family associated with various cellular activities (AAA) 388 515 IPR003959 GO:0005524|GO:0016887
Dere09g0923 630 Coils Coil 182 216 - -
Dere09g0923 630 PANTHER PUTATIVE ATP-ASE 19 623 - -
Dere09g0923 630 SMART AAA_5 384 517 IPR003593 GO:0016887
Dere09g0923 630 Pfam ATPase family AAA domain-containing protein 3, N-terminal 50 316 IPR021911 -
Dere09g0923 630 MobiDBLite consensus disorder prediction 56 73 - -
Dere09g0923 630 FunFam ATPase family AAA domain-containing protein 3 342 532 - -
Dere09g0923 630 MobiDBLite consensus disorder prediction 38 73 - -
Dere09g0923 630 MobiDBLite consensus disorder prediction 160 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0923 Dere-ChrDere09 12194375 12200428 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0923 364 592 Miscellaneous Gene Families AT5G53170 29.832 4.71e-14 73.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0923 09 12194375 12200428 Dere09g0923 09 12194375 12200428 ECH