Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0909 ATGGACGACGCTACGGACTCGTTGGACTTGAAGGTGAGAGTGCTACTGAAGGAGGTGCAGCTAGACTATTCTCCTCAATTAACCAAGTTCGTCGATGACACAGTCTCCGCTATCAAAGCATCCATTGATAAAATCCCTGAAGATTTTAAGGTAACGGCCGATATAGCTCCAAATTTTGTAAGGGACATTGGTGCGGATAAAGTGGAGTTCAAGTTTAAGAAGCCAACGTCTATTAAAATAGGGGGCAGTTATTCCACGCAAACTCTTGCTAGGCCTGACGTAAATGTCGATCTTATTATTAGGTTGCCAAAGGAGAGTTTCCACGAGAAAGATTATTTAAATTATAGATATCATGCCAAGAGATGTCTGTATCTTTGCTTGGTCAAGAAATACTTGGATACTTCTCCATCTTTTGATAAGATTGAATGGTCCACCCTACAAAATGAAGCACGAAAACCTATATTAATTGTTCATTCAGCTGCAAAGGTTGCTGAAGTTTGTGGTGTTGTTATAAGAATAATTCCATCAGCAATGTCTTTATTTAATATATCAAAGTTGAACCTGAACCGTAATAACATTCATACTCCCAATCAAGGGATTGCTCTTGAGGCTACACCCAAGTATAATAGTAGTATTTTGGAAGACTTGTTTATAGAGGATACAGAATTTATTGAGAAAAGTTTTCTTGGATGGAAGGAACTAAGAGAGGCTTCAGTTTTGCTTAAGGTTTGGGCTCAGCAGAGAAGTTCAATATATGTTTATGATTGCTTAAATGGATTTTTAATCTCTGTCATTCTGGCATACCTTTCGACAAAGCAACAAATCAACAAGTCAATGAAGGCAGTTCAAATAATTCGTGTTACCATGAACTTCATTGCCACTTCAGAGTTGTGGAGTTGTGGGCTCTACTTTCTGCAGGAAGGACAGAGTAATATTACAAAAGAGGAAAGGATTCAATTTAAAAGGTCATTTCCAGTTGTCATATGCAATCCATCTGGAAAGTTCAATTTGGCTTTCCGGTTGTCTAGGATTGGTTTTACTGAGCTTCAAGATGAGGCTGCTTTGACGCTTAAATGCTTGGACAAGTGTAGAGATGGTGGATTTGAGGAAATTTTTATGACCAAGATTGACTATGCTGCTAAATATGACTACTGCATGAGAGTAAATTTGAAAGGAAAGAAGGAGGTATATGCGTTGGGATTTTGTTCAGATGATGAGTGCTGGAGATCATATGAGGAGAAAGTACATGGTATTATAACTAAAGGATTGAATGATAGAGCAAAGTTCATTCGTGTTGCCTGGAGAAATACACAGTCCCAATGGAGTGTAAATGACGGCTTGTCTGCACTTGATAAAGAACCATTATTTATAGGAATTTCAGTGAGTACTTTGGAGAAAGCCTATAGGATGGTTGATATTGGCCCAAATGCTGAAAATAAAGAAGAGGCTCTAGAATTTCGTAAGTTCTGGGGGGAAAAAGCTGAGCTTAGGCGATTTAAAGATGGTAGAATTGCAGAAAGCACAGTTTGGGAAAGTGAGCAGTGGACAAGACATCTTATTTTAAAAAGAATAACTGAGCATGCACTTAGCCGACATCTTTCTCTGTCGAAAGAAAATATTGTAGTTGTGGTGGATCAACTTGATTTCTCCTTGCTGCATGGAGCTGGAGATTCCATATCATATTCTGGAAGTTTGCTTGGGGCACTTGATGTTTTGTCAAAGCGGTTGCGCCTTGTTCAAGACATCCCTTTGAAAGTGTCTAGTGTACAGCCTTTAGATTCTGCTTTCAGGCTTACATCAGTCTTCCCTCCTGAACCACATCTTCTGGCTAATGAAAAAATTGAATATTTTAAACTAAATAAGCCCATTCCATCATGCACTCAGCCACTGGAAGTTATGATTCAGCTGGAAGGTTCAGGGAACTGGCCAATGGATGAAATTGCTATTGAAAAAACAAAATCTGCTTTCCTTCTTCAGATTGGAGAGAGTCTTCAAAAGGTTTGGGGGATGACATGTATTGCAACTGAGGATGATGTGGATGTATTAATGTCTGGATATGCATTTCGTCTTAAAATTTTGCATGAGAGGGGCCTCAGTTTGCTCAGCAAGAATAGTGAGAATGGCCATGCAAAGCGCGTTTCTTCTGCTGACAAGAAACTTTTCATCCATAGTCAGCATGCTAGCATGATTAATGGATTACAAAGCCGTTACCCAATATATGGACCAGTAGTTAGACTTGCAAAACGATGGGCTGCTTCACATCTATTTTCGGCTTGCTTGGCAGAGGAAACAGTTGAGCTTTTGGTTGCTTATCTCTTTCTTAATCCTTTGCCATTTAATACTCCTTGTTCGCGGATCACGGGATTTTTAAGGTTTCTGCAGTTACTCTCAGAGTATGATTGGACTTTATCTTCATTGGTTGTTGACATAAATAATGACTTAAGCCAATGTGAGGAGAAAGAAATAAGTGATAACTTCTTGTTAAGCAGAAAGGGTCAGGGAGAGAATGGACAAAGTATAAAGCCAGCGATGTTTATAGCTACAGTTTATGATAAAGTATCTGAGGCTTGGACTGAATTATCACCAAGTGCATTGGAACTTAAACGGCTGGTGGCTTATGCCCGTAGTAGTGCAAACTTGTTGACAAAACTTATATATGAGGATCAGATTGGTTCATATAGTTGGGAGTGCCTTTTTCGAACTCCTTTGAGCAACTTTGACGCCATAATTCTTCTTCACAGAGACAAACTCCCTTATCCCCAAAGACTTCTCTTCCCATCAGAAGTTGATTTCGGAAAACTTGTTGCTAGAGGACGTGCTAGCAAGAGTTTCCAACCCTTGCTTTTACCTAGAGAGTTGAAGGGAAGGCCAGAGGAAGTTAAAAATAAGTTGCTGGTAGACATTGATCCTTTAAGGTGTTTCATCAGGGATTTAGAGAAGGAGTTCTCCTCCGCAATCAAGGTATGGCATGATTTGCTGGGAGGTGATGTTATTGGCCTAACGTGGGGGGAGTGTTATTCTTCAAAGAAACGGAAGCAAGAGGAAGTAGTTGAGAAGGAAGGACATGACCCAAGGAAGGTGTTAAAATCAGTGGGTGAAGCTGGGAAAGGGTTTGTGAGGAGTATTTACTTTCTCAAGCGCCCAAGGATCTTGAATTAA 3159 0.3979 MDDATDSLDLKVRVLLKEVQLDYSPQLTKFVDDTVSAIKASIDKIPEDFKVTADIAPNFVRDIGADKVEFKFKKPTSIKIGGSYSTQTLARPDVNVDLIIRLPKESFHEKDYLNYRYHAKRCLYLCLVKKYLDTSPSFDKIEWSTLQNEARKPILIVHSAAKVAEVCGVVIRIIPSAMSLFNISKLNLNRNNIHTPNQGIALEATPKYNSSILEDLFIEDTEFIEKSFLGWKELREASVLLKVWAQQRSSIYVYDCLNGFLISVILAYLSTKQQINKSMKAVQIIRVTMNFIATSELWSCGLYFLQEGQSNITKEERIQFKRSFPVVICNPSGKFNLAFRLSRIGFTELQDEAALTLKCLDKCRDGGFEEIFMTKIDYAAKYDYCMRVNLKGKKEVYALGFCSDDECWRSYEEKVHGIITKGLNDRAKFIRVAWRNTQSQWSVNDGLSALDKEPLFIGISVSTLEKAYRMVDIGPNAENKEEALEFRKFWGEKAELRRFKDGRIAESTVWESEQWTRHLILKRITEHALSRHLSLSKENIVVVVDQLDFSLLHGAGDSISYSGSLLGALDVLSKRLRLVQDIPLKVSSVQPLDSAFRLTSVFPPEPHLLANEKIEYFKLNKPIPSCTQPLEVMIQLEGSGNWPMDEIAIEKTKSAFLLQIGESLQKVWGMTCIATEDDVDVLMSGYAFRLKILHERGLSLLSKNSENGHAKRVSSADKKLFIHSQHASMINGLQSRYPIYGPVVRLAKRWAASHLFSACLAEETVELLVAYLFLNPLPFNTPCSRITGFLRFLQLLSEYDWTLSSLVVDINNDLSQCEEKEISDNFLLSRKGQGENGQSIKPAMFIATVYDKVSEAWTELSPSALELKRLVAYARSSANLLTKLIYEDQIGSYSWECLFRTPLSNFDAIILLHRDKLPYPQRLLFPSEVDFGKLVARGRASKSFQPLLLPRELKGRPEEVKNKLLVDIDPLRCFIRDLEKEFSSAIKVWHDLLGGDVIGLTWGECYSSKKRKQEEVVEKEGHDPRKVLKSVGEAGKGFVRSIYFLKRPRILN 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0909 1052 Pfam Nrap protein PAP/OAS-like domain 234 375 IPR035367 -
Dere09g0909 1052 Pfam Nrap protein domain 1 96 220 IPR035082 -
Dere09g0909 1052 PANTHER NUCLEOLAR RNA-ASSOCIATED PROTEIN 5 1043 IPR005554 -
Dere09g0909 1052 Gene3D - 215 378 - -
Dere09g0909 1052 Pfam Nrap protein domain 3 380 534 IPR035368 -
Dere09g0909 1052 Pfam Nrap protein PAP/OAS1-like domain 5 737 888 IPR035370 -
Dere09g0909 1052 Pfam Nrap protein nucleotidyltransferase domain 4 562 734 IPR035369 -
Dere09g0909 1052 FunFam Nucleolar protein 6 208 378 - -
Dere09g0909 1052 Pfam Nrap protein domain 6 903 1042 IPR035371 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0909 Dere-ChrDere09 11984668 11999590 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0909 09 11984668 11999590 Dere09g0909 09 11984668 11999590 ECH