Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0884 ATGTGCCTTTTGGCCTTGTTTTCAAGCAAGAAAAGGAGACTGACAACTTCTGTTCTTTTCCTGCACTGGCTGTGTGATTTAAAGGTTCGATTGGTTATGGATAAAAATACAAACAAGCCTAAGGGTTATGCATTCATTGAGTACCTGCACACAAGGGACATGAAAGCTGCTTATAAACAAGCTGATGGTAGGAAAATTGAGGGTAGAAGAGTGCTTGTGGATGTTGAACGTGGGAGGACTGTTCCTAATTGGAGGCCTCGCCGACTAGGTGGTGGGCTTGGTACTACTAGAGTAGGGGGTGAAGAAGTTAATCAGCGATATTCTGGGAGGGAGCAACTGCAATCAGGACCCTCTAGATCTGAAGAACCAAAAGTCCGGGAGGAACGACCGGGTGATCGGGATAGAGAAAAATCCCGTGAAAGAGGTAGGGACCGAGACCGAGAACGAGAGTGGTCGCGTGAACGCTCTCATGATAGGACCCGTGGTCGTGATCATCGTGAGGATAGGCACCACAGAGATCGGGATAGGACTAGGGACAGAGACAGGGAAAGAGATCGCGGACGTGATCGAGATAGAGATCGGGGTCGCGATCGTGAGCGAGGTCGAGATCGTGACAGGGAGAGGGACCGTGATAAGGACAAAGAATATGATCGCCATCGCGAAAGGGATAGAGACTATGAAGTTGGGGACCCTGATCGAGGACGTTCGCATGATAGGGAGTCTGATTATGATCATGTTGAATCTAAACATGAGAGGGATCGACATGGTGAAAGGCAGCGAGATTATGAACCTGAGGATGATCGTGGGTGGTATAATCAACCTGAACATGGACATAGGCATGCAGACCCTGATCATGATGCTGAGCAGTATGATCACTATGAGCATGATCAAGGACGAGGGCAATATGAGCATGGAGATGACCGTGTTGACCATTACAATCAATATCCTGACCATGATAGGTTGGATGATGACTACCACACTGAGCGTACAGCCTCGGAGTCTCGTGACAGGGAGAAAAATCGCGATATGGACCATGAATATCGTCGCTCAGAGAGGTCCCATTCTCGAGAGTATGATTACTAG 1083 0.4848 MCLLALFSSKKRRLTTSVLFLHWLCDLKVRLVMDKNTNKPKGYAFIEYLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQLQSGPSRSEEPKVREERPGDRDREKSRERGRDRDREREWSRERSHDRTRGRDHREDRHHRDRDRTRDRDRERDRGRDRDRDRGRDRERGRDRDRERDRDKDKEYDRHRERDRDYEVGDPDRGRSHDRESDYDHVESKHERDRHGERQRDYEPEDDRGWYNQPEHGHRHADPDHDAEQYDHYEHDQGRGQYEHGDDRVDHYNQYPDHDRLDDDYHTERTASESRDREKNRDMDHEYRRSERSHSREYDY 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0884 360 MobiDBLite consensus disorder prediction 83 360 - -
Dere09g0884 360 SUPERFAMILY RNA-binding domain, RBD 28 100 IPR035979 GO:0003676
Dere09g0884 360 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 28 153 - -
Dere09g0884 360 Gene3D - 24 112 IPR012677 -
Dere09g0884 360 MobiDBLite consensus disorder prediction 120 360 - -
Dere09g0884 360 FunFam U1 small nuclear ribonucleoprotein 70 kDa 9 112 - -
Dere09g0884 360 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 28 71 IPR000504 GO:0003723
Dere09g0884 360 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 28 78 IPR000504 GO:0003723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0884 09 11736181 11738624 Dere09g0884 09 11736181 11738624 ECH