Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0875 ATGGTGAACGTAATGGAGAAAGGTGGTGGAGAAAACCACACGAGGTTCAACAAATATGCTTCTGCTTGTGCTATTGTCGCTTCCATGATATCCGTTATACTGGGCTATGATACGGGTGTTATGAGCGGAGCCATGATATTCATGAAGGAAGATCTCAAAATCAGCGACACTCAAGTGGAGGTTCTTGCAGGAATCCTCAACCTCTGCGCATTAGTAGGATCCTTAACTGCTGGAAGAACCTCTGATTACATAGGTCGCAGGTACACGATCGTGCTAGCCGCCATCCTCTTTCTGTTCGGTGCACTTCTCATGGGCTATGGCCCAAACTACGCCGTTTTAATGGCAGGACGATGCACTGCTGGCATTGGCGTGGGCATTTCCCTTATGATAGCCCCAGTTTACTCTGCAGAAATCTCTTCTGCTTCGTCCCGTGGTCTTCTCACCTCCCTACCAGAGCTTTGTTTAGGTATCGGCATCCTTCTTGGCTATGTCTCTAACTACTTCCTCGGCAAACTAACTTTAAAACTTGGATGGAGATTGATGCTTGGAATCGCAGCAATTCCTTCACTTGTTTTGGTTTTCTGCATTCTAAGACTCCCAGAATCCCCGAGATGGCTAGTCATGCAAGGCCGTCTGGGGAACGCGAAGAAAGTCCTCTTGCAAATTTCTAATACCACAGAAGAAGCTGAACTTCGCTTCAACGATATAAAAGTCGCTGCTGGGATTGACGTCACTCGCCAAGACGACATTGTTAAGCTTCCTACAAGTTCCAAAGGCGAAGAAGTTTGGAAAGAGTTGATTTTAAGGCCTTCACCTTCTGTTCGTTGGATGCTAACTGCAGCTATTGGGATTCACTTCTTTGAGCACGCCACTGGCATAGAAGCTGTCATGTTATATAGCCCAAGAATCTTCAAAAAAGCTGGCGTCACCGCCAAGGACAAGCTCTTGCTCGCTGTGATTGGAATTGGTGTTACTAAGGTTGTCTGTTTGATCATAGCCTCTGTGTTGCTAGACAGAGTTGGAAGAAGGCGACTCTTGCTAACGAGCACTGGGGGGATGATTTGTGCACTGTCTGTATTGGGGTTCAGCTTGACCATGGCAGATCATTCCACTGAGAAGCTCCTATGGGCCTTGGGCCTTAGCATAGTGGCAGCTTATACCACTGTTGGATTCTTTAACATTGGGCTTGGGCCTGTCACATGGGTCTACAGCTCTGAGATATTTCCTTTGAAGTTGAGAGCACAAGGAGCGAGTATTGGAGTTGCAGTGAACAGAGTGGTAAATGCTGTAGTTTCAATGAGTTTTCTTTCAATCAACAAAGCAATGACTATAGGTGGAAGCTTCTTCATGTTTGCTGGTATATCTGCATTAGCTTGGGCGTTCTTCTTCTTTTACCTGCCAGAAACCAAAGGCAGGTCATTGGAAGAAATGGAATCACTTTTCACTAAAAATAAAAACTGTAGAACAGTATCTGCAGAAACTGATCCTGCACAGAATGCTTAA 1503 0.4571 MVNVMEKGGGENHTRFNKYASACAIVASMISVILGYDTGVMSGAMIFMKEDLKISDTQVEVLAGILNLCALVGSLTAGRTSDYIGRRYTIVLAAILFLFGALLMGYGPNYAVLMAGRCTAGIGVGISLMIAPVYSAEISSASSRGLLTSLPELCLGIGILLGYVSNYFLGKLTLKLGWRLMLGIAAIPSLVLVFCILRLPESPRWLVMQGRLGNAKKVLLQISNTTEEAELRFNDIKVAAGIDVTRQDDIVKLPTSSKGEEVWKELILRPSPSVRWMLTAAIGIHFFEHATGIEAVMLYSPRIFKKAGVTAKDKLLLAVIGIGVTKVVCLIIASVLLDRVGRRRLLLTSTGGMICALSVLGFSLTMADHSTEKLLWALGLSIVAAYTTVGFFNIGLGPVTWVYSSEIFPLKLRAQGASIGVAVNRVVNAVVSMSFLSINKAMTIGGSFFMFAGISALAWAFFFFYLPETKGRSLEEMESLFTKNKNCRTVSAETDPAQNA 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0875 500 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 14 485 IPR045262 GO:0015144
Dere09g0875 500 ProSitePatterns Sugar transport proteins signature 1. 77 94 IPR005829 GO:0016020|GO:0022857|GO:0055085
Dere09g0875 500 FunFam probable polyol transporter 4 13 484 - -
Dere09g0875 500 Gene3D MFS general substrate transporter like domains 12 485 IPR036259 -
Dere09g0875 500 Pfam Sugar (and other) transporter 23 481 IPR005828 GO:0016020|GO:0022857|GO:0055085
Dere09g0875 500 ProSitePatterns Sugar transport proteins signature 1. 333 350 IPR005829 GO:0016020|GO:0022857|GO:0055085
Dere09g0875 500 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 470 IPR020846 GO:0022857
Dere09g0875 500 NCBIfam sugar porter family MFS transporter 18 477 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere09g0875 500 PRINTS Sugar transporter signature 382 403 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere09g0875 500 PRINTS Sugar transporter signature 405 417 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere09g0875 500 PRINTS Sugar transporter signature 288 298 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere09g0875 500 PRINTS Sugar transporter signature 31 41 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere09g0875 500 PRINTS Sugar transporter signature 114 133 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere09g0875 500 SUPERFAMILY MFS general substrate transporter 14 478 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0875 Dere-ChrDere09 11681784 11683621 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0875 10 486 Organic Solute Cotransporters AT4G36670 68.201 0.0 685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g0625 13 7842220 7844306 Dere09g0875 09 11681784 11683621 ECH
Dere09g0875 09 11681784 11683621 Dere09g0875 09 11681784 11683621 ECH