LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere09g0839	ATGGCGCCCTCTTACTGTGTGAGGGAGAGAAAGCCGTGTGTGCGTTGGGTTGAGAAGTACTTCAATGACTGCCTCTGTAATCTGAAAGATGATTTCTCGTTCTCTTTCGGGCTTATCAGTCTAGTGTCCTGGGGAGTAGCAGAAATTCCTCAGATAATCACCAACTTTCGCACCAAGTCCAGCCATGGAGTTTCCCTTGCCTTTCTCTTCACTTGGGTTGCAGGAGATATATTCAATCTGGTGGGTTGTATTCTGGAGCCAGCCACGTTGCCTACCCAGTTATACACAGCTCTGCTTTACACAGCAACTACCATTTTATTAGTACTGCAAAGCCTCTACTATGATCATTTCTATAGATGGTGCAGAGGTCGTCGTAAAGTCAATAAGCAAGAGGATGAAGAAGAGAAAAAACCATTGAGACCGAAACTAAGTGACAAGTCTGGAATTCCCATACCAAATGGCACTCCCAAAGCATCCACAGCCCCACGAAGGGAGGTGTTCTATTATACGTCAGCGAGATCGCTGGCTGGCAGTGGTACCCCTCCCTTTCGCACCTACATGAGAGCAGCTAAGAGTGGCCCTTCAGCCATGGAATTGAACTCTGACTCCTCCTCTGACGACGAGGCTCCTCCTTCTTCCTCCAACAAGTCTCCTTCCCAACCTAGGCCCATCCCACGTTCTTTCGCTGGAGGCTATGGAACATTTCTAGCAGCATCGGTTAACTTGCCTATGCAGGGCAATGCTTTAAGAGAAGGATATATAGCATTCACTGCAAGGAAAGTCTTTCAGCTGGAGCCCGAGTCGCACAGTGCTTTTGGTCAGTGGCTGGGATGGCTCATGGCTGCTATATATATGGGAAGCCGGCTCCCTCAAATATGGTTAAATATTAAAAGAGGCAGTGTGGAGGGCTTAAACCCTCTCATGTTCGTCTTTGCTCTGCTTGCTAATGTTACCTATGTGGCAAGTATTCTTGTACGAACTATTGAATGGGAGAACATCAAAGCTAATATGCCATGGTTGTTGGATGCTGTAGCTTGCGTGGCTCTGGACCTATTTATAATACTGCAATACATCTATTACAGATATTTCCGAAAGAGATCAGGAAGGGATGATCACGAGTGCGATGACTACAAAGAAGCAAGTAAAAGTGCCGCGTGA	1158	0.468	MAPSYCVRERKPCVRWVEKYFNDCLCNLKDDFSFSFGLISLVSWGVAEIPQIITNFRTKSSHGVSLAFLFTWVAGDIFNLVGCILEPATLPTQLYTALLYTATTILLVLQSLYYDHFYRWCRGRRKVNKQEDEEEKKPLRPKLSDKSGIPIPNGTPKASTAPRREVFYYTSARSLAGSGTPPFRTYMRAAKSGPSAMELNSDSSSDDEAPPSSSNKSPSQPRPIPRSFAGGYGTFLAASVNLPMQGNALREGYIAFTARKVFQLEPESHSAFGQWLGWLMAAIYMGSRLPQIWLNIKRGSVEGLNPLMFVFALLANVTYVASILVRTIEWENIKANMPWLLDAVACVALDLFIILQYIYYRYFRKRSGRDDHECDDYKEASKSAA	385

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere09g0839	385	Gene3D	-	35	130	-	-
	Dere09g0839	385	Gene3D	-	273	373	-	-
	Dere09g0839	385	MobiDBLite	consensus disorder prediction	194	224	-	-
	Dere09g0839	385	PANTHER	SEVEN TRANSMEMBRANE PROTEIN 1-RELATED	5	364	-	-
	Dere09g0839	385	MobiDBLite	consensus disorder prediction	196	222	-	-
	Dere09g0839	385	FunFam	Vacuolar membrane PQ loop repeat protein	272	370	-	-
	Dere09g0839	385	MobiDBLite	consensus disorder prediction	129	159	-	-
	Dere09g0839	385	MobiDBLite	consensus disorder prediction	129	143	-	-
	Dere09g0839	385	SMART	ctns	286	317	IPR006603	-
	Dere09g0839	385	SMART	ctns	46	77	IPR006603	-
	Dere09g0839	385	Pfam	PQ loop repeat	273	327	IPR006603	-
	Dere09g0839	385	Pfam	PQ loop repeat	32	88	IPR006603	-
	Dere09g0839	385	FunFam	PQ-loop repeat family protein / transmembrane family protein	32	128	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere09g0839	Dere-ChrDere09	11256118	11259837	Dispersed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dere09g0839	09	11256118	11259837	Dere09g0839	09	11256118	11259837	ECH