Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0828 ATGGCGGAAATTAAGCTTACCCGGGTAGATCAAGGCCAAACCAAGATAAGAAATGTTCCAATCGCCGTGACCCCAGAAGGTTTTTGGTGTTGTCCTTCTCCTGTTGTATTTCAGAAAAGCCTCAAAGCTCAAAATTCTCTGAATAAAACCAAACCCTCCGCACCGCCAGCAAAAATCAATGCTCAGAAGAAGCCAGTCCCAGTGAGTGAGAGAAGACAAGCGCCTAACCCGTCAAGATTGGCGGTGTCTTATGATCAGCAATGTACTGGTTCAGAGAGACCTCCAGTTGGCACACCTGTAGCTACAGAGAGAGCACCGAGGCCCGGAGTTGAAAGTTTGCCAAGAAAGGTAGCAATTGAGTTTGGTGAGGCTGGAACTTGTGATACGAAGGTCGTTTTATTTGGAAAGCAGGGATTTTGTGTGAAGTTAAGTGTGCACAGGGCTGTTCTGACCGAGAAGAGCAGCTTCTTTGCTGAGAAACTTTCTGAACAATCTGGTTTGTCATGTCTCCAAATTAATGATTGTGAGGATGTTGAAATATATGTTGAAACTGTTGGACTGATGTATTGTAAAGATGTGAAGCAGCGGCTTATGAAGCAAAGTGTTTCTCGCACGCTTAGAATACTGAAGGTTGCAGAATTCCTTGGCTTCAGCTCTTGCATCCAGTCATGTTTGGAGTACTTGGAGGCAGTCCCTTGGGTAGGAGAAGAAGAAGAAAAGGTTGTCTCAACAGTTATGCGACTTCAAGGGGAAGGGATTGGAGTTAAACCTGTGTTGAAACGGGTTTCTTCCAACATCTTTAATGTCCCTAAAGATACTCTTTCCCACGTTATTGAACTTGTTCTCAAAAGCAACGAGGAAAGAGGTCGCCGTGAGATGAAGTCCATAGTTCTGAAGCTCCTTAGGGAGAATAACAGTGCCCCAAGCCATGCAGGCTCAGCTGACATCTGTATTGAAATGATATACAGATCATGCAGAAGCTGCTTGGATTCTTTACTGTCTCTATTCAGGCTGGCCGCAGAACCAGACTTTGCAAATAAACCCAGTGATCACAGAGAACCCGTAGCAAAACACATAGCTCTTGAAGCTGATAACTTGTCATGGTTGGTGGAGATCTTAATTGACAAACAAGCAGCTGATGAGTTTGCCGTGATGTGGGCAAACCAGCAGGAATTGGCTGTCCTACATGGAAAGCTACCTGTTGTATGTCGTTACCATGTTAGCTGCATTTCTGGAAAACTATATGTTGGGATTGGAAGAGGGGAACTGTTGCCATCAAAGGAGACCCGTCAATTGTTGTTACGGACATGGCTACAGCCTCTAATGGATGACTACAGCTGGTTGCAGCATGCATGCAGGTCGTTTGATAGGAAAGCTGTGGAGGAAGGAATTGGGAGGACAATCCTTACTCTGCCTCTTGAGGATCAACAGAGTATTCTTCTTTCATGGCTGGGAAGTTTCTTGAAAGCTGGTGATAACTGCCCAAATCTTCAAAGAGCTTTTGAGGTGTGGTGGCGCAGAACTTTCATTAGACCTTATGCGGAAGGACATGGTAGTGTCGTGTCGGATAGCTGTACGACGTCAAAGGAGCAAGTGTAA 1599 0.4528 MAEIKLTRVDQGQTKIRNVPIAVTPEGFWCCPSPVVFQKSLKAQNSLNKTKPSAPPAKINAQKKPVPVSERRQAPNPSRLAVSYDQQCTGSERPPVGTPVATERAPRPGVESLPRKVAIEFGEAGTCDTKVVLFGKQGFCVKLSVHRAVLTEKSSFFAEKLSEQSGLSCLQINDCEDVEIYVETVGLMYCKDVKQRLMKQSVSRTLRILKVAEFLGFSSCIQSCLEYLEAVPWVGEEEEKVVSTVMRLQGEGIGVKPVLKRVSSNIFNVPKDTLSHVIELVLKSNEERGRREMKSIVLKLLRENNSAPSHAGSADICIEMIYRSCRSCLDSLLSLFRLAAEPDFANKPSDHREPVAKHIALEADNLSWLVEILIDKQAADEFAVMWANQQELAVLHGKLPVVCRYHVSCISGKLYVGIGRGELLPSKETRQLLLRTWLQPLMDDYSWLQHACRSFDRKAVEEGIGRTILTLPLEDQQSILLSWLGSFLKAGDNCPNLQRAFEVWWRRTFIRPYAEGHGSVVSDSCTTSKEQV 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0828 532 SUPERFAMILY POZ domain 141 229 IPR011333 -
Dere09g0828 532 MobiDBLite consensus disorder prediction 46 109 - -
Dere09g0828 532 Gene3D Potassium Channel Kv1.1; Chain A 121 245 IPR011333 -
Dere09g0828 532 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 117 515 IPR038920 -
Dere09g0828 532 MobiDBLite consensus disorder prediction 79 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0828 Dere-ChrDere09 11125096 11129167 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0828 09 11125096 11129167 Dere13g0595 13 7381536 7384679 CCT
Dere09g0828 09 11125096 11129167 Dere09g0828 09 11125096 11129167 ECH