Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0387 ATGAGCACCGGGGAGCTCCTCAGCATCGAACCTCTCGAAATCAAGTTCCCCTTTGAGTTGAAGAAGCAGATCTCATGCTCCATTCAATTGTCAAATAAGACCGACAACTATGTAGCTTTCAAGGTCAAAACAACCAACCCAAAGAAGTATTGTGTTCGTCCAAACACTGGAATTGTCTTGCCACGATCCACATGTGATGTTATAGTTACCATGCAAGCGCAGAAAGATGCACCACCTGATATGCAATGCAGGGATAAATTTCTTCTCCAAAGCGTAAAAGCAAATGATGGTATCACCCCAAAGGATATCACAGCAGAAATGTTCAATAAGGAGGCAGGCCATGTGGTCGAGGAGTGCAAATTGAGAGTGCTGTATGTGTCTCCACCTCAACCACCATCTCCAGTTCCAGAAGGTTCTGAGGAAGGATCGTCACCCAGAGCTTCTGTTTCAGAAAATGGAAATGTCAATAACACTGACTTCCCAACAGTAACAAAAGCATTTACTGAACAACCTGAGGTTCAAGACAAATCTGCAGAGGCCAAAGCTCTAATCTCTAGGCTGACCGAGGAAAAGAATAATGCAATTCAATTAAATAGCAAGCTTCGCCAGGAACTGGAGCTGCTGAGGCGTGAAGGCAACAAAAATCGTGGTGGAGTCTCGATTATGTTTGTCATCTTAATTGGCTTGCTTGGCATAATTATGGGATATCTCATGAAGAAGACCTAA 726 0.4366 MSTGELLSIEPLEIKFPFELKKQISCSIQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDVIVTMQAQKDAPPDMQCRDKFLLQSVKANDGITPKDITAEMFNKEAGHVVEECKLRVLYVSPPQPPSPVPEGSEEGSSPRASVSENGNVNNTDFPTVTKAFTEQPEVQDKSAEAKALISRLTEEKNNAIQLNSKLRQELELLRREGNKNRGGVSIMFVILIGLLGIIMGYLMKKT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0387 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Dere09g0387 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Dere09g0387 241 Coils Coil 173 211 - -
Dere09g0387 241 FunFam Vesicle-associated protein 1-1 1 129 - -
Dere09g0387 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Dere09g0387 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Dere09g0387 241 MobiDBLite consensus disorder prediction 127 158 - -
Dere09g0387 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Dere09g0387 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 238 IPR016763 GO:0005789
Dere09g0387 241 MobiDBLite consensus disorder prediction 143 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0387 Dere-ChrDere09 6651850 6655568 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0387 09 6651850 6655568 Dere09g0387 09 6651850 6655568 ECH