Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0250 ATGGTTGTGATTTCCCGGGCGGGTTCAATGCACTGCATGCACAGTGAGATGATACGTTTCAAAGTTGCGAACGGTGCACTTTTTAGCACAAGACAAAAGTTTGATGTATCCCATATAAAGAAAACTTGTGTTGGTTTCTCTTCCTTATCATGTGACTCTGCTGGGAAGATTCAGATTTCACAGAAGAGGAATTTTACTGTAGTTGGATCTAAACGGGGTCATACAGTGATTGTTGCTGCCAGCCCTCCCACAGAAGATGCTGTAGTTGCTGCTGAGCCACTTACAAAGAAGGATCTTGTGGAATACCTTGCCTCCGGCTGTAAGCCGAAGGAAAAATGGAGAATCGGCACTGAACATGAGAAGTTTGGTTTTGAGTTTGGAAGCCTACGTCCTATGAATTATGAACAAATAGCAGAGCTGCTGAATGGCGTTGCTGAGAGATTTGATTGGGATAAAGTAATGGAAGGTGATTACGTTATTGGACTTAAACAGGGGAAGCAAAGCATATCATTGGAGCCTGGTGGTCAATTTGAGCTTAGTGGTGCCCCTCTAGAAACGTTGCATCAGACTTGTGCTGAAGTTAACTCACACCTCTATCAGGTTAAAGCTGTTGCTGAGGAAATGGGAATTGGATTTTTGGGAATTGGTTTCCAGCCTAAGTGGGGACTCAAAGACATACCTATAATGCCAAAGGGAAGGTATGAGATAATGAGGAATTACATGCCCAAAGTTGGTTCTCTTGGACTTGACATGATGTTCAGAACATGCACTGTACAGGTCAATCTGGACTTCAGTTCTGAAGCTGATATGATCAGGAAATTTCATGCTGGTCTAGCCTTGCAGCCAATAGCAACAGCACTATTTGCAAATTCACCCTTCACAGAAGGAAAGCCAAATGGTTTTGTCAGTATGAGAAGCCATATATGGACTGATACTGATAAGGACCGCACAGGGATGCTGCCATTTGTTTTTGATGACTCCTTTGGGTTTGAGCAGTACGTTGATTATGCTCTGGATGTTCCTATGTATTTTGTCTATCGGAAGGGGAGATATATCAACTGCACTGGAATGACCTTCAGGGACTTTATGGCTGGAAAGCTTCCTTGTATTCCTGGTGAATTGCCGACCCTAAATGATTGGGAGAATCACTTGACAACTATATTTCCTGAGGTCAGGCTGAAGAGGTACTTGGAGATGAGGGGTGCTGATGGAGGGCCTTGGAGAAGGTTATGTGCTTTACCAGCATTTTGGGTGGGTTTACTGTATGATGAGGTATCTCTACAGAATGTTTTAGATATGACAGCTGATTGGACCCTGGAAGAAAGACAGATGCTAAGGAATAAGGTTCCCAGAAATGGTCTAAAGACACCATTCCGAGACAGTTTGCTGAAGCATGTTGCTGAAGATGTTCTGAAATTTGCGAAGGATGGTTTGGAAAGAAGAGGATTTAAGGAATCAGGATTCTTAAATGAGGTAGCTGAGGTGATTAGAACAGGTGTTACACCAGCTGAAAGACTTTTGGATTTGTATCATGGAAAGTGGGGGCAATCTGTAGATCCTGTATTTGAAGAATTGCTTTATTGA 1584 0.4293 MVVISRAGSMHCMHSEMIRFKVANGALFSTRQKFDVSHIKKTCVGFSSLSCDSAGKIQISQKRNFTVVGSKRGHTVIVAASPPTEDAVVAAEPLTKKDLVEYLASGCKPKEKWRIGTEHEKFGFEFGSLRPMNYEQIAELLNGVAERFDWDKVMEGDYVIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPIMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFHAGLALQPIATALFANSPFTEGKPNGFVSMRSHIWTDTDKDRTGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKGRYINCTGMTFRDFMAGKLPCIPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEVSLQNVLDMTADWTLEERQMLRNKVPRNGLKTPFRDSLLKHVAEDVLKFAKDGLERRGFKESGFLNEVAEVIRTGVTPAERLLDLYHGKWGQSVDPVFEELLY 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0250 527 Pfam Glutamate-cysteine ligase family 2(GCS2) 147 437 IPR006336 GO:0004357|GO:0042398
Dere09g0250 527 FunFam Glutamate--cysteine ligase 79 527 - -
Dere09g0250 527 SUPERFAMILY Glutamine synthetase/guanido kinase 105 525 IPR014746 GO:0003824
Dere09g0250 527 Gene3D - 79 527 - -
Dere09g0250 527 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 62 527 IPR035434 GO:0004357|GO:0006750
Dere09g0250 527 PIRSF GCL 81 527 IPR035434 GO:0004357|GO:0006750
Dere09g0250 527 NCBIfam glutamate--cysteine ligase 93 527 IPR011556 GO:0004357|GO:0006750
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0250 Dere-ChrDere09 5289266 5297185 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0250 09 5289266 5297185 Dere09g0250 09 5289266 5297185 ECH