Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0244 ATGGCTTCTCAACTACTGTTCACAACAAGGAGCTTGTACTGCTCTAGTTGCATTTTCACCCTGACGCATGGGGATGACAAGTTGTTTGATGCTAACTTTCAAGAACTGAAAATTAGAGATCAGAAGGATTTGACAGTTACCTTTTCTATAAAGATCTTGGGGGGCTATCTATGTCAAGGAGATAAGAAAAGATTTGAGAATATGTCTGGATGCAATAATTCACCTAAAAGTGATCGTCGCTCAATTAAATATAATAGAAATCAACATGGGAGTCCATCCTTTGAAGCTGATCTTTCTTGTGTAAATTATAAACCCACTACTTCCAATGATGAGACTAACCAATGCTACCAAAATTCTGACCTAAAGTCCCCCAAGATACTGAGCACAGCTCAACTCGTCTCTGCTATAGGCCATATATGGGATTCTGCAAGTCAATCACTGACATGTTCTGACCCTAAGGAAATTGTGAATCAAGACGGTAAAGGTTTCCTGAAAGAGAAAGCGCTAAATAACTTTGATGATAAAATAAATGGCAGGGCTTATATTTCAAATGATACTAAATACAGTCCTAATAATACAAGGGCTACTGGCTATGGTTCTCCCACTAAGCTGGCAAACATCGGTTTCCCTAGGGTAACGGAAAAAATAGTTGTACGTGAATCTTGTAATGGAAGTCAAGATTATATTTGTTCTTTATTCCAGAAAATTTTGCAGAGCAGAATAAACAATTCAGATGAGCCAGCAAAGGATATTGTGAGTGAGGAGATCTCTTTTAAATTGGGAAATATATATTGGTGTATGAGTAAGAATGCTTCTAAAGGACTAAAGTATCCTGTCAAGGTGACTGAACCTGAGAACACGAAAACTGCTGCTCCAGTGGCCTGGCGCAGGACTTCAATAGAAGCAAGTACCCCTACATTGGCTAATGAGACTGATGAATGCAATCCTGATATAATTGTACATGATGATCTACGATCTAGTGATGCAATGCTGGATGCGAGAAAAGTTTCATCTCTGTCTTCTGACTATTTTCTTAGAGATGTGCATGATACCCCAACGGATGTTGGTGTTAGTCAGACCCTATCTCTTAGTATCTGTTCAGATTATCATCTAAACTCAAAAGTTACAAGTGATAGTGCTTCTGTGGGGTGTCAACTTGTGTTTGATGATAAAAAATTGTTAAAGACCAAACAAAGACACCTCTCAGACACCATAACTGATGATGAATCTAAGATTGAGGTCTCAGCAAAAGAGAAACTTTATTATTCCCTTGCCAAACAAGAATATGCATTTTCTGGGGCATTGGCCGGTGTATGTGTCAGCCTTTGTCTACATCCTGTTGACACAATTAAGACAGTCACTCAGTCATGCAATGCCGAAAAGAAGTCCATATTCTACATTGGCAAATCAATTGTTTCTGATAGAGGTTTTCTTGGACTTTATCGTGGAATTACTACAAGCATTGCATGCTCAGCTCCAATTTCTGCAGTGTATACTTTCACCTATGAATCAGTTAAAGCTGCTTTGCTTCCTTATCTCCCAAAGGAGTATTATTCTTTTGCCCATTGTGTGGCAGGTGGTTGTGCAAGCATTGCCACCTCTTCCATTTTTACTCCTAGTGAGCGAATAAAGCAGCAGATGCAGGTTGGATCTCATTATCGCAACTGCTGGGATGCTTTGGTTGAAATTATCAGGAAGGGTGGTTTTCATTCACTATATGCTGGTTGGGGAGCTGTACTCTGCCGGAATGTCCCACACTCAATTGTCAAGTTTTACATGTATGAAAAGTTGAAGCAAGTAATGTCATCTTTGCCATCAAGCGTAAGACCTAACACATTTCAGACTTTAGTTTGTGGAGGATTAGCTGGGTCTACTGCTGCTTTCATCACCACTCCTTTTGATGTGATTAAGACAAGGTTACAGACACAGATTCCTGGATCTGTGAATCAGTATCATAATGTCTTTCATGCCCTTTGCAATATAGGCAAGAATGAAGGTGTGAGGGGCCTGTACAGGGGATTGGCTCCAAGGTTGATTATTTACATGTCTCAAGGATCGCTGTTCTTTGCTTCGTATGAATTTTTCAAGAGGCTATTTTCTTTAGAAGCATAA 2112 0.3954 MASQLLFTTRSLYCSSCIFTLTHGDDKLFDANFQELKIRDQKDLTVTFSIKILGGYLCQGDKKRFENMSGCNNSPKSDRRSIKYNRNQHGSPSFEADLSCVNYKPTTSNDETNQCYQNSDLKSPKILSTAQLVSAIGHIWDSASQSLTCSDPKEIVNQDGKGFLKEKALNNFDDKINGRAYISNDTKYSPNNTRATGYGSPTKLANIGFPRVTEKIVVRESCNGSQDYICSLFQKILQSRINNSDEPAKDIVSEEISFKLGNIYWCMSKNASKGLKYPVKVTEPENTKTAAPVAWRRTSIEASTPTLANETDECNPDIIVHDDLRSSDAMLDARKVSSLSSDYFLRDVHDTPTDVGVSQTLSLSICSDYHLNSKVTSDSASVGCQLVFDDKKLLKTKQRHLSDTITDDESKIEVSAKEKLYYSLAKQEYAFSGALAGVCVSLCLHPVDTIKTVTQSCNAEKKSIFYIGKSIVSDRGFLGLYRGITTSIACSAPISAVYTFTYESVKAALLPYLPKEYYSFAHCVAGGCASIATSSIFTPSERIKQQMQVGSHYRNCWDALVEIIRKGGFHSLYAGWGAVLCRNVPHSIVKFYMYEKLKQVMSSLPSSVRPNTFQTLVCGGLAGSTAAFITTPFDVIKTRLQTQIPGSVNQYHNVFHALCNIGKNEGVRGLYRGLAPRLIIYMSQGSLFFASYEFFKRLFSLEA 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0244 703 MobiDBLite consensus disorder prediction 69 90 - -
Dere09g0244 703 SUPERFAMILY Mitochondrial carrier 429 695 IPR023395 -
Dere09g0244 703 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 388 701 - -
Dere09g0244 703 FunFam Mitochondrial substrate carrier protein-like 403 550 - -
Dere09g0244 703 ProSiteProfiles Solute carrier (Solcar) repeat profile. 424 508 IPR018108 -
Dere09g0244 703 ProSiteProfiles Solute carrier (Solcar) repeat profile. 517 600 IPR018108 -
Dere09g0244 703 FunFam Mitochondrial substrate carrier protein-like 551 703 - -
Dere09g0244 703 Pfam Mitochondrial carrier protein 611 700 IPR018108 -
Dere09g0244 703 Pfam Mitochondrial carrier protein 429 509 IPR018108 -
Dere09g0244 703 Pfam Mitochondrial carrier protein 518 601 IPR018108 -
Dere09g0244 703 Gene3D Mitochondrial carrier domain 517 702 IPR023395 -
Dere09g0244 703 Gene3D Mitochondrial carrier domain 394 516 IPR023395 -
Dere09g0244 703 ProSiteProfiles Solute carrier (Solcar) repeat profile. 610 698 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0244 Dere-ChrDere09 5203227 5208756 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0244 430 697 EF-hand Containing Proteins AT2G35800 31.227 2.60e-33 135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0244 09 5203227 5208756 Dere09g0244 09 5203227 5208756 ECH