Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0234 ATGTGGATATTTGGTTGGAAAGGGCCATCTGGATTCTCAGCCACTTCCACTGCGGAGCAAGTTACTCATGGAATTGATGGAAACGGTCTCACGGCCATCGTCACAGGAGCATCAAGTGGTCTTGGTCTTGAGACCACCCGAGTTTTAGCATTGCGTGGTGTCCATGTTGTTATGGCAGTAAGGAATGTGGACTCTGGCATCAGTGTCAAAAACACAATACTTGAGGAAATCCCCACTGCTAAAATTGATGTTATGAAGTTAGATCTTAGCTCAATGGCATCAGTAAGGAAATTTGCTGCAGATTACAACTCTTCTGGGCTGCCACTCAATCTGCTAATTAACAATGCAGGAATTATGGCTGCCCCATTCATGCTTTCCCAAGACAACATTGAATTGCAGTTTGCAACCAATCATCTTGGTAGTTTACTAATATATAGCCATTTCCTGTTAACAAACCTTTTATTGGAAACTATGAAGAAAACTGTGCAAGAATTTAAGCGGGAGGGAAGGATAGTTATTCTAGCATCAGAGGCACACAGATTTGCATATCGTGAAGGGATTTGTTTTGATACAATTAACGATGAATCAGGATACAACAGTTATTTTGCTTATGGTCAATCAAAGCTTGCTAATATTTTGCATGCAAAAGAGCTTGCACGGCGCTTGAAGGAAGAAGGAGTGGAAATAACTGTGAACTCCCTTCATCCAGGATCAATTATAACAAATATTCTTCGGTATCATGGTTATGTAAATGTCGTTGCTAGTATGGTGGGAAAGTTCTTCCTTAAAAATGTGCAGCAGGGAGCTGCAACTCAATGTTATCTAGCATTACATCCACAAGTCAAGGGAATATCTGGTGAATATTTTATGGATAGCAACAAGGCAAAACCAAGCTCTCTGGCTACAGATTCAGATTTGGCGAGAAAACTATGGGAATTCAGCTTGAGCCTGACCAATCCAAACTAG 966 0.4099 MWIFGWKGPSGFSATSTAEQVTHGIDGNGLTAIVTGASSGLGLETTRVLALRGVHVVMAVRNVDSGISVKNTILEEIPTAKIDVMKLDLSSMASVRKFAADYNSSGLPLNLLINNAGIMAAPFMLSQDNIELQFATNHLGSLLIYSHFLLTNLLLETMKKTVQEFKREGRIVILASEAHRFAYREGICFDTINDESGYNSYFAYGQSKLANILHAKELARRLKEEGVEITVNSLHPGSIITNILRYHGYVNVVASMVGKFFLKNVQQGAATQCYLALHPQVKGISGEYFMDSNKAKPSSLATDSDLARKLWEFSLSLTNPN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0234 321 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 293 IPR036291 -
Dere09g0234 321 PANTHER RETINOL DEHYDROGENASE 9 318 - -
Dere09g0234 321 Gene3D - 24 320 - -
Dere09g0234 321 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Dere09g0234 321 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Dere09g0234 321 PRINTS Glucose/ribitol dehydrogenase family signature 227 244 IPR002347 -
Dere09g0234 321 PRINTS Glucose/ribitol dehydrogenase family signature 163 179 IPR002347 -
Dere09g0234 321 PRINTS Glucose/ribitol dehydrogenase family signature 204 223 IPR002347 -
Dere09g0234 321 CDD retinol-DH_like_SDR_c_like 29 311 - -
Dere09g0234 321 Pfam short chain dehydrogenase 31 244 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0234 Dere-ChrDere09 5118332 5122301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0234 33 297 Acyl Lipid Metabolism Gene Families AT3G55290 27.143 1.58e-09 56.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0234 09 5118332 5122301 Dere09g0234 09 5118332 5122301 ECH