Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0226 ATGATTAATGCCACGTCAATTCTATTCATCGTTGGCTTGCAATTCAGGGTCTTTGTATCTGCATCTGCATCCGCTGTTCCTGTTCATTCTTCGTCTTTGGGTTCCTTGAAGCTCTTTCAGAGATTGGAAGAGCGTCCTGCACAACAAAAGATGCCGCCTTTTGCAGCATCTAGTTCCCAGGGCTTCCCTCATCCTAAATTAGACTCTAATATAGTCGCCATTGATGTAGGTGGTCAATTCTTCCAAACCACAAAGCAGACTCTCAATTCTGCCGGCCCCAAGTCCTTCTTCGCTAAAATCGCCAACTCCGTCTCTGAATTTCAACGCTCTGCCTCCTTCATCGACAGAGACCCTGAGTTGTTCGCTATCCTCCTTTCCCTTCTACGCACCGGTAATCTTCCTTCCAAAGCCAAGGCATACGATCTGCAAGATCTGATTTCTGAGTCCCAATTTTACGGCATCGAAAACATACTGATGAATTCCCTATCCAGCCCTTCTCTATTCGAACCCTTCAACCTCGAGAAATCCATTATTTTGCCTCTCAACGGACGAGATACACCCTCTGCCATTGCCGCTACGCAGTTCGGTTCGGTTCATGTCGCACATGGCAGCAAGATAACGTCTTTTGATTGGTCCCTTCGACGCAAGTCGACGTTTCTGACGCAATTCATGGCCATCGATTCTCTATTAGCGCTTTCGCATTCTGTGGTGGCTGCGGGTGCCAATGACTATTCGGGGATGCAAATTATTGATTTGAAAAGGAAGGTTATCAAGACGACCTTAGACTGGGAGAATGTAACCAAGTCTGGTTCCACAGTCCAGGCGATTGGATCTTCGTCGGAGTACCTATTTACAAGTTTCGAATCAGGTCGCCGCAATTCAAATTCAATCATGGTATATGATTTAAATACCTTAAGCCCGGTTACAGAGATTGGTCACAATGAGATTTTGGGTGCTGATATTGATTCTGCGATCCCAGCAACGAAACTGAAATGGGTTTCGGGTTACAACTTGCTCGCGGCATCTGGGTCGCATAGTGGTCCTTCGGGAGTATCGGGCAACATAAGATTATGGGATGTACGGTCTGGGAATGTTGTTTGGGAGATGACAGAGAAGATAGATTGTTTTGCTGATGTGACGGTTTCGGATAACTTGTCGGTGATCTTCAAGGTTGGGGTACATTCTGGGGAGGCATTTTTTATGGATTTGCGTAATTTAAGTGCTGGAACTTCCTGGGTTTGTCTAGGTGACAAGAGAAAAGTGCCGACTGGGAAGAAGGAAGGCATAGGATGCAAGGTTGAAGATCAAGGAAATCAGGTGTTTTGCAGCAAGGGAGGAGATGTAGAAATGTGGACAGAGGTTATAATGAGCTCTGCAAAGGATGCGGAGGACAGATTAAAAGACAGGATATTTAAAAAGAACTTGATGGGTAGGGTAAAGGACATGGGAGGTTCTAAGATCACCAATATGGCGTTTGGAGGGAATAAAATGTTCTTGACTAGGAAGGATCAGCAATATGTTGAGGTTTGGCAGAGTTCTACTGTGGAACTTTGA 1554 0.455 MINATSILFIVGLQFRVFVSASASAVPVHSSSLGSLKLFQRLEERPAQQKMPPFAASSSQGFPHPKLDSNIVAIDVGGQFFQTTKQTLNSAGPKSFFAKIANSVSEFQRSASFIDRDPELFAILLSLLRTGNLPSKAKAYDLQDLISESQFYGIENILMNSLSSPSLFEPFNLEKSIILPLNGRDTPSAIAATQFGSVHVAHGSKITSFDWSLRRKSTFLTQFMAIDSLLALSHSVVAAGANDYSGMQIIDLKRKVIKTTLDWENVTKSGSTVQAIGSSSEYLFTSFESGRRNSNSIMVYDLNTLSPVTEIGHNEILGADIDSAIPATKLKWVSGYNLLAASGSHSGPSGVSGNIRLWDVRSGNVVWEMTEKIDCFADVTVSDNLSVIFKVGVHSGEAFFMDLRNLSAGTSWVCLGDKRKVPTGKKEGIGCKVEDQGNQVFCSKGGDVEMWTEVIMSSAKDAEDRLKDRIFKKNLMGRVKDMGGSKITNMAFGGNKMFLTRKDQQYVEVWQSSTVEL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0226 517 CDD BTB_POZ_KCTD-like 72 152 - -
Dere09g0226 517 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 66 514 IPR045068 -
Dere09g0226 517 SUPERFAMILY POZ domain 69 160 IPR011333 -
Dere09g0226 517 Gene3D Potassium Channel Kv1.1; Chain A 63 167 IPR011333 -
Dere09g0226 517 SUPERFAMILY Tricorn protease domain 2 239 513 - -
Dere09g0226 517 SMART BTB_4 70 169 IPR000210 GO:0005515
Dere09g0226 517 Gene3D - 190 517 IPR015943 GO:0005515
Dere09g0226 517 Pfam BTB/POZ domain 72 160 IPR003131 GO:0051260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0226 Dere-ChrDere09 5078783 5080754 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0226 09 5078783 5080754 Dere09g0226 09 5078783 5080754 ECH