Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0193 ATGTCTTCAGTTCCTAGATTCACTATGGCAGCCATCTCTAATTCCTTGTCCCTGAAGCACGGCCTCTCACTTTGGTGTCCTCAAACCACGTCCCTCAATCGACCTAATCCTTCTTCTTCTGTCTCATTTAGAACCTTCCGGAGATGTTACGCCGCTTTCGCTAATGAGAATCGGGAGTATGTGATTGTTGGTGGCGGAAATGCCGCCGGATATGCTGCTCGTACTTTCGTCGAGCACGGCATGGCGGATGGACGCCTATGTATTGTGACCAAAGAGGCATATGCGCCTTACGAGCGTCCGGCTTTGACAAAAGGTTATCTATTCCCACGAGATAAGAACCCAGCGCGCCTTCCTGGATTTCACACTTGTGTTGGATCCGGTGGAGAGAGGCAAACTCCAGAGTGGTATGAAGAGAAGGGGATAGAGATGTTATATCAAGATCCAGTAAAAAGTATTGACATTGATCAGCAAACTTTGACGACAAATTCTGGAAAACTGCTTAAGTATGGCTCGCTTATTATTGCTACAGGAGCTACAGCCTCGAGATTTCCAGAGAAAATTGGGGGAAATCTACCTGGTGTTCATTACATCCGTGATGTTGCAGATGCTGATTCACTAGTTTCATCATTGGAGAAAGCACGCAAGGTAGTTGTTGTTGGAGGTGGTTATATAGGAATGGAGGTTGCTGCTGCAGCTGTTGGTTGGCAACTTGATACAACAATTATATTTCCAGAGGATCATTTATTGCAAAGACTATTCACTCCTCCTCTTGCCCAAAGATATGAAGAACTCTACCGAAAGAATGGTGTCAAAATCTTGAAGGGTGTCTCCATAAAAAACTTGGAAGCTGGTTCTAATGGGCATGTAGCTGCTGTAAAACTTGGTGATGGATCTACAGTAGAAGCAGATACGGTAATTTTAGGCATTGGAGCGAAACCTGCATTGGGTCCCTTTGAAAGGGTGGGTCTGAATACAGATGTTGGTGGTATACAGGTGGATGGTCAGTTCCGGACAAGTGTTCCTGGAATCTTTGCTATTGGTGATGTAGCAGCCTTCCCATTGAAGATATACAACCGCATCACACGAGTTGAACATGTGGATCATGCTCGTCGCTCAGCACAACACTGTGTGAAAGTGTTACTCAGTGCACAAACTCACATGTATGATTATCTTCCGTACTTCTACTCAAGGGTGTTTGAATATGAAGGGAGCCCCAGGAAAGTCTGGTGGCAATTTTTTGGGGACAATGTTGGGGAAACAGTTGAAATTGGGAATTTTGATCCTAAAATCGCTACATTCTGGATTGAATCTGGTAAGCTGAAAGGAGTTCTCCTTGAAAGTGGAAGCCCTGAGGAGTTTCAGCTGCTGCCCAAACTTGCCAGAAGTCAGCCTGTGGTTGATAAAGCCAAACTTGAAAAGGCATCTTCAGTGGAGGAGGCCCTAGACATTGTTCGGGCATCCTTGTTGGGTTGA 1473 0.4542 MSSVPRFTMAAISNSLSLKHGLSLWCPQTTSLNRPNPSSSVSFRTFRRCYAAFANENREYVIVGGGNAAGYAARTFVEHGMADGRLCIVTKEAYAPYERPALTKGYLFPRDKNPARLPGFHTCVGSGGERQTPEWYEEKGIEMLYQDPVKSIDIDQQTLTTNSGKLLKYGSLIIATGATASRFPEKIGGNLPGVHYIRDVADADSLVSSLEKARKVVVVGGGYIGMEVAAAAVGWQLDTTIIFPEDHLLQRLFTPPLAQRYEELYRKNGVKILKGVSIKNLEAGSNGHVAAVKLGDGSTVEADTVILGIGAKPALGPFERVGLNTDVGGIQVDGQFRTSVPGIFAIGDVAAFPLKIYNRITRVEHVDHARRSAQHCVKVLLSAQTHMYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGETVEIGNFDPKIATFWIESGKLKGVLLESGSPEEFQLLPKLARSQPVVDKAKLEKASSVEEALDIVRASLLG 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0193 490 SUPERFAMILY FAD/NAD(P)-binding domain 55 377 IPR036188 -
Dere09g0193 490 Gene3D - 183 310 IPR036188 -
Dere09g0193 490 Gene3D - 61 376 IPR036188 -
Dere09g0193 490 Pfam Pyridine nucleotide-disulphide oxidoreductase 59 373 IPR023753 GO:0016491
Dere09g0193 490 Gene3D - 393 479 IPR016156 GO:0016491|GO:0050660
Dere09g0193 490 PRINTS Pyridine nucleotide disulphide reductase class-I signature 215 240 - -
Dere09g0193 490 PRINTS Pyridine nucleotide disulphide reductase class-I signature 343 350 - -
Dere09g0193 490 PRINTS Pyridine nucleotide disulphide reductase class-I signature 303 317 - -
Dere09g0193 490 PRINTS Pyridine nucleotide disulphide reductase class-I signature 59 81 - -
Dere09g0193 490 FunFam Monodehydroascorbate reductase 393 480 - -
Dere09g0193 490 PRINTS FAD-dependent pyridine nucleotide reductase signature 302 318 - -
Dere09g0193 490 PRINTS FAD-dependent pyridine nucleotide reductase signature 328 350 - -
Dere09g0193 490 PRINTS FAD-dependent pyridine nucleotide reductase signature 61 80 - -
Dere09g0193 490 PRINTS FAD-dependent pyridine nucleotide reductase signature 215 233 - -
Dere09g0193 490 PRINTS FAD-dependent pyridine nucleotide reductase signature 169 187 - -
Dere09g0193 490 PANTHER APOPTOSIS-INDUCING FACTOR 1 58 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0193 Dere-ChrDere09 4712817 4717251 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0193 166 419 Acyl Lipid Metabolism Gene Families AT3G17240 24.723 5.38e-12 65.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0193 09 4712817 4717251 Dere09g0193 09 4712817 4717251 ECH