Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0182 ATGAAGTGCCGATCCGTGGCGTGCATATGGTCAGGCACGCCCCCGACTCACAGAGTTACCGCCGTCGCCAGTTTCAGTCAACCGCCATCCTTCTACACTGGTGGATCCGATGGCTCCATCATCTGGTGGGCCCTCTCCGATAACTATTCCAGCCCGGAAGTTAAAGCTGTGGGTATTTTGTGTGGTCATGCAGCACCGGTCACTGATCTTGGTATATGTAGTCCTACCACAGCAGAAAAAGATACGGGCCGTTCAAGTAATTTAGTGGTCAATTCTGCTTCAAGTAATTTTGTTGCATTAATAAGTGCATGTACTGATGGCTTCTTGTGTGTGTGGAGTAGAAGCAGCGGTCATTGCCGGTGCAGGAGGAAATTGCCGCCTTGGGTGGGCAGTCCATGCATGATTCGAACACTGCCTTCAAGAGCAAGATATGTATGTATTGGTTGTTCTTTCATGGACACTGTCCATTTGTCAGACCACTACTCCGTGAATTCCATGGAAGGAAATGAAGGCCTAATGGATAGAGAAACTCAGCCCAGGAAGCCCCCAAAATGCACTATCGTTATTGTTGATACATATTCACTCACCATTACCCAAACTGTCTTTCATGGAAATCTATCTATTGGCCCCATGAAGTTTATGGCTGTAGTTTCAGCCGATAATGATATAGAGAAGCATTCTGTATTTGTGGCTGATTCAGTTGGTAAGCAACAAATGGTTTCAATATCAAAGGATCCTCATGATCAGGGGGAAAACTTGACTAGTTTGCCCAAAGATACATCTCAGATGGACAGTTCTGTTAGGGTTGAGGAATTTAGTGGTGCGCAACAAATTATTTCAATTGCAACCCATGGGAATGTTGTTGCTTTTATGTTGAGAGACCGCTGCATATTCAGGTTAATATCTAGCGATACAAAACTAGGAGAGATTTCTTTTGTCAATGACCTTTTATGTTCCGATGGGCCTTCTACTCAAGCTCATGTGATCTGGGGCATGTTTCTTGAAGGTGATGGTGCAGGGAATATGCTGAATACCCATGAAAACAGTTGTTTGATTCAAGAAAATTTTGCTGTGTGGAATAATAGAGGTTCTGCAGTTGTTTATAAAATGTCATACCGGAATGAAGTTTTTAAATGTGAGCCTCATTCTGAGATTCCCACTACTTGTTATAAGCCTGATGTGAGAGTATCATTTTTTTTCTTACAAGTGAATCAATGGCTGCTCCGCGTTGAATCTGTTTGCTTCCACCTTGAGGAACCTTCACTATGGAGACCCCATGTCACAATCTGGTCACGGCATCATTTTGATAATAAGCATGGTAAATTTTACCGGCAATGTAGAATGCTCAGCGAAGGTGTTTCTTTCATTGACTTGTTTGAGAACTCTACTCAGTTCAAGGGGTTGAATGGTGTAGAGGTGGAATCAACTTCTATTAAGGATAGCTTCAATAATTACAATGTTAACAAAGGGCAGATTGTTTCTTCTTCAATGATCATATCAGAGAGCCTCATTGCTCCTTATGCTGTTGTATATGGATTCTTAAGTGGATTAATAGAGGTTGTAAGATTTGATCTGTTTCAGGGAATATGTTTAGATGGTATAAGTTCCAAAAATGAGGAAAAGCCAGCTGCTTGCAAACAGTACTTCTCTGGGCACACAGGAGCTGTACTTTGCTTGGCAGCTCATCAAATGATGGGTAGTGCCAAAGGCTGGAGTTTTAATCGGGTTTTGGTGTCTGGAAGCATGGATTGCACGGTTCGTATATGGGATCTTGACACTGGCTGCCTTATTATGGTCATGCATCATCATGTGGCTCCAATGCGCCAAATTATTCTTCCCCCGTCTTTGACCGATCATCCTTGGAGTGATTGCTTCCTTTCAATTGGAGAAGACTCATGTGTTGCTCTTGTTTCTCTTGAGACTCTCCGGGTGGAGAGAATGTTTCCTGGTCATGTGAACTATCCTTCAAAAGTTGTATGGGATGGAGCAAAAGGATACATTGCTTGTCTCTGCCAAACTCATTCTGGAACATCTGATACTACTGATTTATTATACATTTGGGACGTAAAGACAGGTTGCCGTGAGCGAATCCTACGTGGGACTGCTGCACATTCCATGTTTGATCATTTTTGTGATAGCATCAGCATGAACTCCATATCTGGTACATTGTTGAATGGAAATACATCAGTTTCTTCATTACTTCTCCCAATAATTGAAGATGGAAGGTTCTCCAAGTCCTCATCCAGTCTTTCAGGGAGTTTGATCACTTCATCTAGGTCATCACCAAGCATTTCGAATGTGGCTGAGCCGAATGCTTCCCAATCTCATGCAGGCAAAGCAAATTCATCTTCTCCATCTGCCCCCTGGAGTAAGAAGCTTCCAATCAAATGCTCTAGCCCATTCCCTGGTATTGTGGCTTTAAGTTTTGATCTTGCATCATTAATGTTCTCTTATCAGATGCCTGAGTCCATTGAGAGTGGAGGTTCTAAGCCAGTGAATATCAATTCGAAGCAGCAGGAAATTCAAAAACAAAATCCCAACCATGAAAGTCAAGAAACACATAAAGTCCTGACTGATACTGAAGAGGGGCATCATAAGCTATTGGAAGACTACTTGCTTCGATTTAGCTTGTCATTTTTACATTTGTGGGATGTGGATACTGAACTTGATAATTTGCTGACAAGAGATATGAAGCTGAGGAGGCCAGAAAATTTTATAATAGCTTCAGGTCTCCAGGGGGATAGAGGATCTTTGACATTGACATTTCCTGGTCTGAGTGCTATTCTTGAGCTCTGGAAATCATCATCTGAGTTTTGTGCAATGAGGTCACTAATGATGGTATCCCTTGCCCAACGTTTGATTAGCGTGTCTCACTTTGGTTCAGCAGCCAGCAGTTCTTTAGCAGCATTCTATACTCGGACTTTCACAGAGAAATTTCCTGATGTGAAGCCACCTTCATTACAGCTTCTGGTGGCTTTTTGGCAAGCTGAGAGTGAACATGTACGTATGGCGGCACGCTCTTTATTTCATTGCACAGCCTCTCATGCCATCCCACTACCTCTATGCAATTCAAACACTTTTGAGCCAACCAATATAAGCTCTCTAGATGGAAACAGAGGCAAAGGGCACGGTGATACAAGATCAGAAGGCAGATCTTTTGAGGTGGAAGAACAAGGAATCACCCAAACTGAGGAATCGAATATACTTGCATGGTTAGAATCATTTGAAGTGCAAGACTGGATTTCTTGTGTTGGAGGAACAAGTCAAGATGCAATGACATCTCACATTATTGTTGCTGCTGCATTGGCAATCTGGTATCCTAGTCTTGTGAAGCCAAGTCTTGCCACATTAGTTGTTCATCCTTTGATGAAGTTGGCTATGGCCATGAATGAAAAGTATAGCTCTACTGCTGCTGAGCTCCTTGCAGAGGGCATGGAGAGTACATGGAAAGAGTGCATTGGGTCTGAGATACCTCGTCTGATTGGGGATATTTTTTTCCAAATAGAACTGAGTGGCTCATCTACAAATTTAGTAGCAGAAACTCCAGCTGTATCAATTTCTATTCAAAAATCTTTGGTTGAGATTCTTCTTCCAAGTTTAGCCATGGCTGATATACCTGGTTTTTTGACTGTGGTAGAAAGTCAAATTTGGTCTACTGCATCTGATTCACCCGTCCACTTGGTGTCCCTGATGACTCTCATAAGGGTTATGCGTGGTTCTCCAAGAAACTTGGCTCAATATCTTGACAAGGTTTGTAAAGCCACTCATGCTGCTGCTTCTAGTGGGACAGATCTGCAGGTAATCAACTTCATTTTACAAACTATTGATCCAAGCAACTCAGTCATGCGGAAAACTTGCTTTCAAAGTTCAATGACAACTTTAAAGGAGGTTATACGTGTATATCCTATGGTTTCTATGAATGGTGCATGGACCAGATTGGCAGTTGGGGATGTGATTAGAGAGGTTAATAACGCAAGCATCAGGGTTTATGACATGCAAAGTGTGACAATGATCAAAGTTTTGGATGCAAGTGGGCCTCCTGGACTCCCGACTTTACTTGCAGCAGCATCAGAAACCACGTTAACTACAGCTATTTCAGCTCTAAGCTTCTCACCAGATGGAGAGGGGCTGGTTGCTTTCTCTGAACATGGGCTTATGATCAGATGGTGGTCATTGGGATCTGTATGGTGGGAGAAACTAAGCCGGAACTTTGTTCCTGTCCAGTGCACCAAACTTATATTTGTTCCTCCTTGGGAGGGATTTTCTCCTAATTCATCCAGGTCAAGCATAATGGCCAACATATTGGGAACTGATGGACGGTCAAGCTTTAAGGAGAATGCTAGGGATTCAGGTCATGGGGACAGTATAAGACAACTGCTTCATAATCTTGACCTCTCTTACCGATTGGAATGGGTTGGTGAACGAAAAGTGCTTCTTACGAGGCATGGCCATGAATTAGGCACTTTCCAGTTACAATTCAACACCGCCAAACTAGCAAGAGACAAATCAGGCGGTCTTGGTGCGCCACGAAACAAATTTGGCTGGTTTAACTTGAATCATGGTCGGCTGTACGCTAAGGTCTTCGGAAGATACAAAGAAAAGAATAGTGGAATCATGGGGTACTGTGGGTTAGTATGGGGTCTGATGTTGTGTGTCTTGGTTGGTCACATTAATGGAGTAGTCATGTTGGAGCAAGGGTGCATGAGCTCGTCAGATTATTTTGACTATGGAGATGCTCTTGGCTAG 4746 0.4292 MKCRSVACIWSGTPPTHRVTAVASFSQPPSFYTGGSDGSIIWWALSDNYSSPEVKAVGILCGHAAPVTDLGICSPTTAEKDTGRSSNLVVNSASSNFVALISACTDGFLCVWSRSSGHCRCRRKLPPWVGSPCMIRTLPSRARYVCIGCSFMDTVHLSDHYSVNSMEGNEGLMDRETQPRKPPKCTIVIVDTYSLTITQTVFHGNLSIGPMKFMAVVSADNDIEKHSVFVADSVGKQQMVSISKDPHDQGENLTSLPKDTSQMDSSVRVEEFSGAQQIISIATHGNVVAFMLRDRCIFRLISSDTKLGEISFVNDLLCSDGPSTQAHVIWGMFLEGDGAGNMLNTHENSCLIQENFAVWNNRGSAVVYKMSYRNEVFKCEPHSEIPTTCYKPDVRVSFFFLQVNQWLLRVESVCFHLEEPSLWRPHVTIWSRHHFDNKHGKFYRQCRMLSEGVSFIDLFENSTQFKGLNGVEVESTSIKDSFNNYNVNKGQIVSSSMIISESLIAPYAVVYGFLSGLIEVVRFDLFQGICLDGISSKNEEKPAACKQYFSGHTGAVLCLAAHQMMGSAKGWSFNRVLVSGSMDCTVRIWDLDTGCLIMVMHHHVAPMRQIILPPSLTDHPWSDCFLSIGEDSCVALVSLETLRVERMFPGHVNYPSKVVWDGAKGYIACLCQTHSGTSDTTDLLYIWDVKTGCRERILRGTAAHSMFDHFCDSISMNSISGTLLNGNTSVSSLLLPIIEDGRFSKSSSSLSGSLITSSRSSPSISNVAEPNASQSHAGKANSSSPSAPWSKKLPIKCSSPFPGIVALSFDLASLMFSYQMPESIESGGSKPVNINSKQQEIQKQNPNHESQETHKVLTDTEEGHHKLLEDYLLRFSLSFLHLWDVDTELDNLLTRDMKLRRPENFIIASGLQGDRGSLTLTFPGLSAILELWKSSSEFCAMRSLMMVSLAQRLISVSHFGSAASSSLAAFYTRTFTEKFPDVKPPSLQLLVAFWQAESEHVRMAARSLFHCTASHAIPLPLCNSNTFEPTNISSLDGNRGKGHGDTRSEGRSFEVEEQGITQTEESNILAWLESFEVQDWISCVGGTSQDAMTSHIIVAAALAIWYPSLVKPSLATLVVHPLMKLAMAMNEKYSSTAAELLAEGMESTWKECIGSEIPRLIGDIFFQIELSGSSTNLVAETPAVSISIQKSLVEILLPSLAMADIPGFLTVVESQIWSTASDSPVHLVSLMTLIRVMRGSPRNLAQYLDKVCKATHAAASSGTDLQVINFILQTIDPSNSVMRKTCFQSSMTTLKEVIRVYPMVSMNGAWTRLAVGDVIREVNNASIRVYDMQSVTMIKVLDASGPPGLPTLLAAASETTLTTAISALSFSPDGEGLVAFSEHGLMIRWWSLGSVWWEKLSRNFVPVQCTKLIFVPPWEGFSPNSSRSSIMANILGTDGRSSFKENARDSGHGDSIRQLLHNLDLSYRLEWVGERKVLLTRHGHELGTFQLQFNTAKLARDKSGGLGAPRNKFGWFNLNHGRLYAKVFGRYKEKNSGIMGYCGLVWGLMLCVLVGHINGVVMLEQGCMSSSDYFDYGDALG 1581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0182 1581 MobiDBLite consensus disorder prediction 744 788 - -
Dere09g0182 1581 SMART WD40_4 53 113 IPR001680 GO:0005515
Dere09g0182 1581 SMART WD40_4 641 688 IPR001680 GO:0005515
Dere09g0182 1581 SMART WD40_4 542 590 IPR001680 GO:0005515
Dere09g0182 1581 SMART WD40_4 5 44 IPR001680 GO:0005515
Dere09g0182 1581 SMART WD40_4 1349 1391 IPR001680 GO:0005515
Dere09g0182 1581 Pfam WD domain, G-beta repeat 545 590 IPR001680 GO:0005515
Dere09g0182 1581 PANTHER RABCONNECTIN-3B, ISOFORM A 3 1491 - -
Dere09g0182 1581 MobiDBLite consensus disorder prediction 1033 1058 - -
Dere09g0182 1581 Gene3D - 461 802 IPR015943 GO:0005515
Dere09g0182 1581 Gene3D - 3 295 IPR015943 GO:0005515
Dere09g0182 1581 ProSiteProfiles Trp-Asp (WD) repeats profile. 549 599 IPR001680 GO:0005515
Dere09g0182 1581 MobiDBLite consensus disorder prediction 1040 1054 - -
Dere09g0182 1581 ProSitePatterns Trp-Asp (WD) repeats signature. 577 591 IPR019775 -
Dere09g0182 1581 SUPERFAMILY WD40 repeat-like 13 700 IPR036322 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0182 09 4604481 4617548 Dere09g0182 09 4604481 4617548 ECH