Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0119 ATGTCTACAAAAATATTCTCAAAAGATAATGTGGATTTGAATCCGAAGGTTCATCTGCGTTTCGATTTATACCAAAATTTCTTATCGACACTTCCTCCATATTCCAAATTAGGGAAAGTAGGCAAGGAGATGAAGATTGATTATTTGAAACATAAGTTTCTCTACAGGCACAAAAACTTGTTCCTCAAGCTCGTGCTTGCCATATTCTTTGTTGGTCTTGCTTTTCGACTCCTTTTCTTTCATTCCCCAGAAATTTCGCCCGTTTTACAATCCCCTTTTCCTGAGAAAAATACAATTCTAGAACCCCCTGTTTCAACACATGATACTGAGGATGAAGCCAAAATTGCAGATCAAGTATCTCACACAGAAAAGTGTGATCTCTTTATAGGGGATTGGATTCCAAACCCCTCGGGTCCAGCTTATACCAATGAAACTTGCAACTTCATCGAAGGCCATCAGAATTGCTTAACAAATGGGCGCCCCGATACAGGATATATGTATTGGAGATGGAGACCGCGAGACTGTGAGTTGCCTCAATTTGATGCCGAGAGATTTCTCAAAATGATGCGAAATAAAAACTGGGCATTAATTGGTGATTCCATATCACGCAACCATGTGCAATCGTTGCTGTGCATGGTTTCAACGGTGGAGCAAGCCATGATGGTCTACCATGACGAGGAATATAGATCAAGAAAGTGGCACTTCCCCTTATACAACTTCAGCTTGTCAGTTATATGGTCACCATTTCTTGTAGAAGCTGCTATATTTGAGGACATGAATGGTGTTTCAACTTCTGAAGTTGAGTTGCATCTTGACAAACTTCATAGTGAATGGAAGGATCAGTACCAGAACTTTGATTACATGATTATTTCTACTGGGAAATGGTTTCTTAAATCTTCAATTTACTATGAGAATGACACTGCATTGGGCTGCCACAACTGTCCAAAGAGGAATCTCACAGAACTGGGGTTTGATTTTGCTTATCGCAAAACCCTCCAACTAGTCCTGAACTTCATTGCATCCTCCAAACACAAAGGCTTGATCTTATTTAGAACATCCACACCAGATCACTTTGAGAATGGGGAGTGGTTTAGTGGGGGAACTTGCAATAGAACAGCACCAGTAAAGGAAGGTGAGATGGAAATGAAGGATTTGAACAGGATTCTTCGCAACATTGAATTAGAGGAGTTTGCTACAGCAGCTACTAATGCTTCAAGAAATGGAGTAAACCTTAAATTGCTTGATCTGGCGCCACTTTCACTATTGAGGCCGGATGGACATCCTGGACCATTCAGAGAGTTTCATCCATTTGCACGGGGCCACAATGCTCAAGTTCAGAATGATTGTTTGCATTGGTGCTTACCAGGGCCCATCGACTCTTGGAATGACATAATAATGAAGATGGTCTTAGACGGCTAA 1419 0.4109 MSTKIFSKDNVDLNPKVHLRFDLYQNFLSTLPPYSKLGKVGKEMKIDYLKHKFLYRHKNLFLKLVLAIFFVGLAFRLLFFHSPEISPVLQSPFPEKNTILEPPVSTHDTEDEAKIADQVSHTEKCDLFIGDWIPNPSGPAYTNETCNFIEGHQNCLTNGRPDTGYMYWRWRPRDCELPQFDAERFLKMMRNKNWALIGDSISRNHVQSLLCMVSTVEQAMMVYHDEEYRSRKWHFPLYNFSLSVIWSPFLVEAAIFEDMNGVSTSEVELHLDKLHSEWKDQYQNFDYMIISTGKWFLKSSIYYENDTALGCHNCPKRNLTELGFDFAYRKTLQLVLNFIASSKHKGLILFRTSTPDHFENGEWFSGGTCNRTAPVKEGEMEMKDLNRILRNIELEEFATAATNASRNGVNLKLLDLAPLSLLRPDGHPGPFREFHPFARGHNAQVQNDCLHWCLPGPIDSWNDIIMKMVLDG 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0119 472 Pfam PMR5 N terminal Domain 123 176 IPR025846 -
Dere09g0119 472 Coils Coil 375 395 - -
Dere09g0119 472 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 74 465 IPR029962 GO:0016413
Dere09g0119 472 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 177 468 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0119 Dere-ChrDere09 4013568 4017678 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0119 09 4013568 4017678 Dere09g0119 09 4013568 4017678 ECH