Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0082 ATGACTTTGACGTCGTGCACTCCTTGCTTCTCGCGGCTTTTTCCTCCTCCTTCTCCTGCTTCGCTCCCTAAACTCTATGAGACTAGTGCAATTCACTGCGGTTTCACTTCTTTTCTGCCTCTATTCTTGGGGACTTCCTTAATTCCTCCCAATATATCGAAAATCGTCAAGCCGAAAGCTTCCGTGAGCGAGAGCGATCATGAAATTTCACAAAACAACGATTCCGAGCTATTAGACCAAGCGTTGCTGGTAAGCGTTGCCGCTGCTAAGGACGACAACGAGGCATTGCAGATCATCGCTGAAAAGTCTAGAAAAGATGCAGGTGTCGTATGCACGACGGATTGTTGCTCCATTATTTCGGCTGCTCTTAATCAGAATAATGCGGAACTGGCTTTGTCGGTTTTCTTCGCAATGCGTGCCAGTTTTAATCAAGTTGCTGAGAATGGCCCTTTGGTTAAGAGATGGAAGTGGTCAAGGCCAAATGCACATGTTTACACACTGTTAATTCAGGGTCTTGCCTCATCATTGAGGGTTTCTGATGCTCTTAGGGTTATTGAATATATCTGTGAAGTGGCAGTATCTCCTGGTGAGGAGGTACCTTTTGGAAAGATAGTAAGATGCCCTAGTTGTAGGATAGCCGTTGCTGTTGCGCAGCCACAACAAGGTATTCAGATAGTATCCTGTGCGAAGTGTCGCTACCAATATGAGCTTGTTTCCGGTGACATAATCAGTATTCAATCAGAAGAAATCAGCATGGATATTACGCCATGGGAAAGGGGGTTAAGATTCCTGCAACTCATGAAGCAAAGCATTCCTGCTGCTGTTCACTCTATTGTGGTGCAGACCCCTTCTGGTGTGGCTCGCACACACAGATTTGCCACTAATACAGTCGATCTACCAGCACAAGAAGGAGAAAGAGTAACTATTGCTGCGGCAGCTCCATCAAATGTCTATATAGAAGTGGGCCCCTTTAAATTTAGTCCAAGGGCCCCTGATTTCTATCCTGGTGAGGCTATGTGCTTGACAAACCACAAAGATGGCCGAGAATCACTTTTATTAAGAGCCCCAACAAAAGAAGGAAGTTCATCATTGCTTAAACCCTCTTTCCTCTTTCCTCTTCTTGCTGTCTTCGCAACCAGTGATGCGGCATCTGGACTTATTGACCCTAGCCTGCCCCAAATCCTATCGGTTGCCGCAGTTTCATCTCTTGCTGTTGGTGCAACATTGAATTCTTTTGTTTTTCCCCAGTTAAATCAGCTTCCGCAAAGATCAGTAGAAGTAATTGCTATCAAACAACAACTTTTATCTCAATATGATGTGCTTCAGTCTCGCATCAGAGACCTGAAAGAAGCTTCTGAAAAGGAGGTTTGGATGTTGGCTCGCATGTGCCAACTGGAGAACAAAATTTCAGCTGTTGGTGAACCTTCATATCGGGCCCGGAGAAGTAGAATCAGGAAGGTTCAGGAGAGCTTGCAAAACTCCCTCAGGGGACGGATTGAACTGATTGACAGCTATGCCAGAATCTCTTCAATGATTGAAATTGAGGTGGAGATGGACACTGAGGTTCCTGCTGCTGAAACTACTAGCAATGCGGATAGCATCATGGAACAGATACAACAAATCATGGAGCTTGAAAATCTTGAAGAGAGATGGAAAATACAAGCCGAGGCCAATGATGAGGCTGAAAGGCTTCTTAGTTCGCAGTCCTTACCTTCTGAAGAAGTTTAA 1728 0.4508 MTLTSCTPCFSRLFPPPSPASLPKLYETSAIHCGFTSFLPLFLGTSLIPPNISKIVKPKASVSESDHEISQNNDSELLDQALLVSVAAAKDDNEALQIIAEKSRKDAGVVCTTDCCSIISAALNQNNAELALSVFFAMRASFNQVAENGPLVKRWKWSRPNAHVYTLLIQGLASSLRVSDALRVIEYICEVAVSPGEEVPFGKIVRCPSCRIAVAVAQPQQGIQIVSCAKCRYQYELVSGDIISIQSEEISMDITPWERGLRFLQLMKQSIPAAVHSIVVQTPSGVARTHRFATNTVDLPAQEGERVTIAAAAPSNVYIEVGPFKFSPRAPDFYPGEAMCLTNHKDGRESLLLRAPTKEGSSSLLKPSFLFPLLAVFATSDAASGLIDPSLPQILSVAAVSSLAVGATLNSFVFPQLNQLPQRSVEVIAIKQQLLSQYDVLQSRIRDLKEASEKEVWMLARMCQLENKISAVGEPSYRARRSRIRKVQESLQNSLRGRIELIDSYARISSMIEIEVEMDTEVPAAETTSNADSIMEQIQQIMELENLEERWKIQAEANDEAERLLSSQSLPSEEV 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0082 575 Coils Coil 544 564 - -
Dere09g0082 575 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 47 574 - -
Dere09g0082 575 Coils Coil 431 451 - -
Dere09g0082 575 Gene3D Tetratricopeptide repeat domain 78 201 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0082 Dere-ChrDere09 3736159 3745517 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0082 09 3736159 3745517 Dere09g0082 09 3736159 3745517 ECH