Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1126 ATGAGAACAAGCAACCACTTGATTGGCTTACTGAACTTCTTGACGTTCTTGCTGTCAATTCCAATACTGGGAGGCGGCATATGGCTGAGCAGCAGAGCGAACAGCACAGACTGCCTCAGGTTCCTCCAGTGGCCTCTCATCGTCATCGGAATCTGCATCATGGTCATCTCTCTTGCCGGCTTCGCCGGCGCGTGCTACCGCAACACCTTCCTAATGCGGCTCTACCTCGTTGTCATGTTCTTCGTCATCGCAGCTCTCATCGGCTTCATCATCTTCGCCTACGCCGTCACGGACAAGGGCTCCGGTCGAGTTCTCATGAACCGGGTTTATCTGGATTATTATCTGCAGGATTACTCTGGTTGGCTGGAGGAGCGAGTGGCGAGTGATAGCTACTGGGGAAAGATAAGCTCTTGCATTAGAGACTCCAAGGTGTGCAGTAAGATGTCCAGAACTGTTGGTGGGATGCCTGAAACTGCTGATACGTTCTACCACAGAAGGCTCACTCCTATTCAGTCTGGATGCTGCAAGCCTCCAACCGAGTGTGGGTTCGCGTACGAGAAGGAGACAGTGTGGAACTCAGGAGGAGGAGTGGTGGGAGCCAACCCAGACTGCACCAGGTGGAGCAACGATCAAGACCAGCTCTGCTACGCCTGTGACTCTTGCAAGGCTGGGGTTCTGGCCAGCCTCAAGAGAAGCTGGAGGAAGGTGTCTGTCATCAACATAGTCGTCATGATCATCCTCGTCATCGCCTACATTGTTGCTTATGCTGCGTTCAAGAACAATCGCAAAATCGATAACGATGAACCCTCCGGGGAAGCCAGAATGACCAAAGCACACCCCACCAGGATTCATTTTTGA 858 0.5256 MRTSNHLIGLLNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGICIMVISLAGFAGACYRNTFLMRLYLVVMFFVIAALIGFIIFAYAVTDKGSGRVLMNRVYLDYYLQDYSGWLEERVASDSYWGKISSCIRDSKVCSKMSRTVGGMPETADTFYHRRLTPIQSGCCKPPTECGFAYEKETVWNSGGGVVGANPDCTRWSNDQDQLCYACDSCKAGVLASLKRSWRKVSVINIVVMIILVIAYIVAYAAFKNNRKIDNDEPSGEARMTKAHPTRIHF 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1126 285 PANTHER TETRASPANIN-8-RELATED 1 263 IPR044991 GO:0009734|GO:0016020
Dere08g1126 285 Pfam Tetraspanin family 6 253 IPR018499 GO:0016020
Dere08g1126 285 PRINTS Transmembrane four family signature 6 29 - -
Dere08g1126 285 PRINTS Transmembrane four family signature 39 65 - -
Dere08g1126 285 PRINTS Transmembrane four family signature 66 94 - -
Dere08g1126 285 MobiDBLite consensus disorder prediction 266 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1126 Dere-ChrDere08 15129537 15132478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1126 1 277 Miscellaneous Gene Families AT5G60220 71.841 2.41e-130 371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1126 08 15129537 15132478 Dere07g0876 07 12271737 12275274 CCT
Dere08g1126 08 15129537 15132478 Dere08g1126 08 15129537 15132478 ECH