Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0840 ATGATAGGTGGTGCGATAAGGACAGTTTGTTTCTTCGATTTGGTTGGTGAACCTAGTATTTCACATGGCCTTTGTCTATTGAGTCCGAAGTTGGAGTATAATTTGAAGGAAAAAATGACTTGGAAAAGCAAAGGAGAGCAATCTTCCAGAAGCGTTGTGTCCCAGAAATGGGCTCTTTTCTTGTGTCTGGGAAGCTTTTGTGCTGGGATGGTCTTCACCAATAGGATTTGGACTATTCCTGAACCTAAAGGACTTGCAAGGACAAAAGCTATGGAAGCTGAAAAATTGAATTTAGTTTCAGAGGGTTGTAATTCGAGACATTTACAAGAGAAGGAAGTGAAGCGCGAAACTAAGGACATTTATCGGGAAGTTTCCAAGACTCATAATGCCATACAAACTTTGGATAAGACAATTTCAAACTTAGAGATGGAATTAGCTGCTGCAAGAGCGGCTCAAGAGTCTATAAGAAATGGTGCTCCTGTATCAGAAGATGTTAAGATGGCTGAATCATCTGGTAAGAGAAGGTACCTAATGGTCATAGGAATAAATACTGCTTTTAGCAGCCGGAAAAGAAGAGACTCAGTTCGTGCGACCTGGATGCCACAAGGTGAAAAAAGAAAGAAGCTTGAGGAAGAGAAGGGCATTGTTGCTCGCTTTGTGATCGGTCACAGTGCTACCTCAGGGGGTATCCTAGATAGAGCTATTGAAGCAGAGGACAACAAGCACGGCGATTTCCTGAGGCTGGACCATGTTGAGGGATATCTTGAATTGTCAGCAAAGACAAAGACATACTTTGCTACTGCTGTTAAATTATGGGATGCAGACTTCTATGTCAAAGTTGATGACGATGTTCATGTAAATATAGGAACACTCGGAGAAACTCTGATTAGACACCGGCCAAAACCTCGGATATACATCGGATGCATGAAATCTGGGCCTGTCCTTTCTCAAAAAGGTGTAAGGTACCATGAACCTGAATATTGGAAATTTGGTGAGACCGGAAACAAATACTTCCGTCATGCCACAGGACAGTTGTATGCCATTTCAAAAGATTTGGCTACATATATATCAATTAACCAGCAAGTTCTTCACAAGTATGCTAATGAGGATGTCTCGCTAGGAGCTTGGTTTATTGGACTTGATGTGGAGCATATAGATGATCGGAGACTTTGCTGTGGCACTCCACCAGATTGTGAATGGAAGGCACAGGCAGGAAACGTCTGTGTTGCTTCATTTGATTGGAGTTGCAGTGGAATTTGCAGGTCTGCTGAAAGGATCAAAGAGGTTCATAGGCGGTGTGGAGAGGGTGAGAAGGCTTTGTGGAGTGCCTCTTTCTAG 1338 0.4283 MIGGAIRTVCFFDLVGEPSISHGLCLLSPKLEYNLKEKMTWKSKGEQSSRSVVSQKWALFLCLGSFCAGMVFTNRIWTIPEPKGLARTKAMEAEKLNLVSEGCNSRHLQEKEVKRETKDIYREVSKTHNAIQTLDKTISNLEMELAAARAAQESIRNGAPVSEDVKMAESSGKRRYLMVIGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIVARFVIGHSATSGGILDRAIEAEDNKHGDFLRLDHVEGYLELSAKTKTYFATAVKLWDADFYVKVDDDVHVNIGTLGETLIRHRPKPRIYIGCMKSGPVLSQKGVRYHEPEYWKFGETGNKYFRHATGQLYAISKDLATYISINQQVLHKYANEDVSLGAWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWSCSGICRSAERIKEVHRRCGEGEKALWSASF 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0840 445 Gene3D - 173 390 - -
Dere08g0840 445 FunFam Hexosyltransferase 170 391 - -
Dere08g0840 445 Pfam Galactosyltransferase 190 387 IPR002659 GO:0006486|GO:0016020|GO:0016758
Dere08g0840 445 Coils Coil 131 151 - -
Dere08g0840 445 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 135 387 IPR002659 GO:0006486|GO:0016020|GO:0016758
Dere08g0840 445 Pfam Domain of unknown function (DUF4094) 54 150 IPR025298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0840 Dere-ChrDere08 12172113 12176334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0840 39 445 Glycosyltransferase AT1G05170 80.098 0.0 707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0840 08 12172113 12176334 Dere07g0533 07 8344104 8347678 CCT
Dere08g0840 08 12172113 12176334 Dere08g0840 08 12172113 12176334 ECH