Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0755 ATGCAAGAGGACCACATAGGAGGATCACAGGGTTTTCCTATGTTATCATACTTGATGACACCACAGGCTAAGGAAGTAGCAAATGATTGCAGAGATGGTAGAATCAGACCAACTGTAAAAAACAGTCGGACCTCAAATATACAAATCAAATACAGAAAATTCCCAACGTTGAGATCCGTCTCGTCTAGTGCAGTAATATTCACTGGCCAAAGCCCATCCCAATCGCTTCAGCTACCAAAGTATCTCATTCGTGAAGGCTACTACTACGTTACAGAGCTTTCACAAACAGAGACAACCCAAATATATTTGGAAGTTCAGAACTTTGCGAGCAGCCTTGAGACGCAGTTTCAGGGGAGGCGAGTGGGATTGGGGCTGAGAATGGAAGTGGAAAGTGAAAAATCGAGGTCTGATGGGAAGGTTTGGGGGTTTTGTAGAATGCCATTTTGGCAAACGAGCCATACTTCTTCGTCTTCTTCTTCCACATCTTCTTTGCATAATAATGTCCATCACCCAGACCAGAATCTTCAATCTGTTGATAGATCGGCTCATCAGTCTTCAACCACGGTTTCATCTGTGGCCAAGTCTCTGCTTCCTACAAGAAGGAGACTCCGTCTTGATCCCCCCAACAAGCTCTACTTTCCCTATGAACCGGGTAAGCAAGTTAGGAGCGCAATCGCAATTAAAAACACTTGCAAGTCTCGTGTAGCATTCAAGTTTCAAACAACTGCCCCGAAGAGTTGTTATATGCGGCCTCCTGGTGGTATACTTGCGCCCGGTGAAAGTATAATCGCCACTGTATTTAAGTTTGTGGAGCCCCCAGAGAACAATGAGAAACCGATTGATCAAAAGAGCAAGGTTAAATTTAAAATCATGAGCTTAAAAGTGAAAGGAGAAATGGAGTATGTACCGGAACTGTTTGAAGAGCAAAGGGATCAAGTAACAGTTGAGCAAATTCTGCGTGTTGTTTTTCTGGACCCCGAACGTCCTAGCCCTGCCCTGGATAAACTTAAACGACAACTGGCTGAAGCTGAGGCTGCATTGGAAGCACGAAAGAAGCCCCCAGAGGAGAAAGGTCCTAAAACTGTCGGCGAAGGACTTGTTATTGATGAATGGAAAGAAAGAAGAGAAAGATACCTGGCGCGGCAGCAAGTTGAAGGAGTCAATTAG 1167 0.4473 MQEDHIGGSQGFPMLSYLMTPQAKEVANDCRDGRIRPTVKNSRTSNIQIKYRKFPTLRSVSSSAVIFTGQSPSQSLQLPKYLIREGYYYVTELSQTETTQIYLEVQNFASSLETQFQGRRVGLGLRMEVESEKSRSDGKVWGFCRMPFWQTSHTSSSSSSTSSLHNNVHHPDQNLQSVDRSAHQSSTTVSSVAKSLLPTRRRLRLDPPNKLYFPYEPGKQVRSAIAIKNTCKSRVAFKFQTTAPKSCYMRPPGGILAPGESIIATVFKFVEPPENNEKPIDQKSKVKFKIMSLKVKGEMEYVPELFEEQRDQVTVEQILRVVFLDPERPSPALDKLKRQLAEAEAALEARKKPPEEKGPKTVGEGLVIDEWKERRERYLARQQVEGVN 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0755 388 MobiDBLite consensus disorder prediction 344 366 - -
Dere08g0755 388 Gene3D Immunoglobulins 198 328 IPR013783 -
Dere08g0755 388 MobiDBLite consensus disorder prediction 155 194 - -
Dere08g0755 388 SUPERFAMILY PapD-like 191 331 IPR008962 -
Dere08g0755 388 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 201 383 IPR016763 GO:0005789
Dere08g0755 388 Pfam MSP (Major sperm protein) domain 203 313 IPR000535 -
Dere08g0755 388 ProSiteProfiles Major sperm protein (MSP) domain profile. 202 324 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0755 Dere-ChrDere08 11339145 11342850 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0755 08 11339145 11342850 Dere07g0429 07 7104523 7106857 CCT
Dere08g0755 08 11339145 11342850 Dere08g0755 08 11339145 11342850 ECH