Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0749 ATGAGGCGAAGAGCGGCGGATTTTCGAAGGCCAGTAAGGAGGAGGGTTCCGGACGTGTTGTGGTGGGCATTGTTTGGCGTAGTGGTTCTTATTTTCATATATATTGTGGGCAAAGGGAGTCAGATTGAGTCGAGATCGTCATTGTCCAAGAGAATTTACAGAAATGATAGGATTAAGGAAGTCCTTAATATTACTGAAGAGATGTTAAGTCCTAACTCAGTGACCAGACAATTGAATGATCAGATATCCCTGGCAAAATCTTTTGTTGTAATTGCAAAAGAAAGTAACAATCTCCAATTAGCTTGGGAATTAAGTGCCCAGATCCGCAATTCACAGATTCTCCTCTCAAATGCTGCCACAAGACGAGCTCCTTTGACAAGCAAAGAATCAGAAGTTGCTATCCGTGATTTGGCATTGTTGCTATTACAGGCCCAGCAGCTCCATTATGACAGTGCAACCATGATTATGAGACTTAAAGCCAAAATACAAGCTCTTGAAGAGCAAATGAATTCTGTGAATGAAAAGAGTTCAAAATATGGACAAATTGCTGCTGAAGAAGTCCCGAAAAGCTTATACTGCCTTGGTGTCCGGTTGACAACTGAATGGTTCAGAAGCCTTAATTTGCAAAAGAAATTTAAGGAGAAAAGGCAAGTGGAGAAGAAACTCAAGGATAATAATCTTTACCACTTTTGTGTGTTCTCTGATAACATTATTTCTACTTCAGTTGTAGTCAATTCAACTGCAACAAATTCTAAAAGTCCTCATATGGTTGTTTTTCACCTTGTGACTGATGAAATAAATTATGCTGCAATGAAGGCATGGTTTGCCATGAATGACTTTGGTGGAGTGACTGTTGAGGTTCAAAAGTTTGAAGACTTCAGTTGGTTAAACGCTTCATATGTTCCTGTTCTTAAGCAACTTCAGGACTCTGAAATACAGAACTATTACTTTTCTGGTGGCGGTGGTGATAACAGGACACCCATCAAATTTCGGAACCCTAAATATTTATCCATGCTCAACCACCTCAGATTTTATATCCCTGAAGTTTTTCCAGCGCTGAAGAAGGTGGTGTTCCTTGATGATGATATTGTGGTTCAAAAGGATCTGTCTGCTCTTTTTTCCATTGATTTGAATGGCAATGTCAATGGAGCTGTTGAGACATGCATGGAAACATTTCATAGGTACCACAAATATTTGAATTACTCTCATCCTCTTATACGATCACATTTTGATCCTGATGCATGTGGGTGGGCATTTGGAATGAACATATTTGATTTGGAAGAATGGAGGAAAAGGAATGTGACAGGCATCTACCACTACTGGCAGGAAAAGAATGTAGACCGGACATTGTGGAAACTTGGTACCTTGCCGCCTGGACTGTTGACATTCTATGGATTAACTCAGCCCTTGGATCCGTTGTGGCATGTATTGGGGTTTGGCTACACAAATGTTGATCCTCCATTGATAGAGAGGGGGGCTGTACTGCATTTCAATGGCAACTCCAAACCCTGGTTGAAGATTGGGATTGAAAAGTACAAGCACCTGTGGGATAAATACGTTAATTATTCTCATCCTTTTTTACAACAGTGCAACTTTCATTGA 1602 0.4026 MRRRAADFRRPVRRRVPDVLWWALFGVVVLIFIYIVGKGSQIESRSSLSKRIYRNDRIKEVLNITEEMLSPNSVTRQLNDQISLAKSFVVIAKESNNLQLAWELSAQIRNSQILLSNAATRRAPLTSKESEVAIRDLALLLLQAQQLHYDSATMIMRLKAKIQALEEQMNSVNEKSSKYGQIAAEEVPKSLYCLGVRLTTEWFRSLNLQKKFKEKRQVEKKLKDNNLYHFCVFSDNIISTSVVVNSTATNSKSPHMVVFHLVTDEINYAAMKAWFAMNDFGGVTVEVQKFEDFSWLNASYVPVLKQLQDSEIQNYYFSGGGGDNRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDIVVQKDLSALFSIDLNGNVNGAVETCMETFHRYHKYLNYSHPLIRSHFDPDACGWAFGMNIFDLEEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTQPLDPLWHVLGFGYTNVDPPLIERGAVLHFNGNSKPWLKIGIEKYKHLWDKYVNYSHPFLQQCNFH 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0749 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 229 528 IPR029044 -
Dere08g0749 533 Coils Coil 155 175 - -
Dere08g0749 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 228 531 IPR029044 -
Dere08g0749 533 CDD GT8_like_1 228 521 - -
Dere08g0749 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 64 532 IPR029993 GO:0047262
Dere08g0749 533 Pfam Glycosyl transferase family 8 236 507 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0749 Dere-ChrDere08 11251823 11254969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0749 1 533 Glycosyltransferase AT2G20810 79.291 0.0 865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0749 08 11251823 11254969 Dere07g0423 07 7056811 7059728 CCT
Dere08g0749 08 11251823 11254969 Dere08g0749 08 11251823 11254969 ECH