Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0740 ATGATAGTTAATTTGATAATTCCTGTGCCAATTCACATTCGAGCGTTTCGCTACGACAATCCTTTCGATGAGGATGTTAATCCCTTTGCGGATGGATCAACCAGAGGAAAAGCGTCAGGGCCAACAAGTTCTGGTGGAGGTGGATCCTCTGCTACTGACCTCAAAGCAAAGGAGGCGGAACTTAAAGCTAAAGAGGCTGAACTAAATAGGAGGGAACAGGAACTAAAGCGAAGGGAAGATGCTATTGCACGGGCTGGAATAACTTTAGAGGTAAAAAATTGGCCAGCTTGTCTCCCTATCATTCATCACGACGTCACAAATGATATACCATTACATCTTCAGAGGCTCCAGTATGTTGCATTCGCAACATTTTTGGGTATGATCTTGTGCCTTTTTTGGAATCTCGTGACAATTACTGTGGCTTGTATCAAAGGGCAAGGTGTTTCAATCTTGTTTCTCGCTATCATCTACTTTATTTGTGGCGTTCCAGGAGCCTACATATTATGGTATCGTCCTCTTTATCGTGCTATGAGGACTGACAGTGCTCTGAAGTTTGGCTGGTTTTTCTTATGTTACATGGTGCACATCGGTTTTTGCATTTACGCTTCTGTTGCTCCTCCATTTATCCTCGCTGGACAGTCTCTCACGGGGATTCTACCTGCACTATATTTTATTGGCGATCTTCAATTGCTTGGGATATTATACTTTGTTGGGTTTGCACTTTTCTGCGCTGAGTCACTTCTGAGCATCTATGTTATTCAGCAAGTATTAATGTACTTCCGAGGCAGTGGCAAGTCTGCAGAGGCTAAGCGCGAGGCCGCGAGAAGCACCTTCATGGCAGCTCTATGA 849 0.4417 MIVNLIIPVPIHIRAFRYDNPFDEDVNPFADGSTRGKASGPTSSGGGGSSATDLKAKEAELKAKEAELNRREQELKRREDAIARAGITLEVKNWPACLPIIHHDVTNDIPLHLQRLQYVAFATFLGMILCLFWNLVTITVACIKGQGVSILFLAIIYFICGVPGAYILWYRPLYRAMRTDSALKFGWFFLCYMVHIGFCIYASVAPPFILAGQSLTGILPALYFIGDLQLLGILYFVGFALFCAESLLSIYVIQQVLMYFRGSGKSAEAKREAARSTFMAAL 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0740 282 Coils Coil 51 81 - -
Dere08g0740 282 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 19 278 IPR007273 GO:0015031|GO:0016020
Dere08g0740 282 Pfam SCAMP family 92 262 IPR007273 GO:0015031|GO:0016020
Dere08g0740 282 MobiDBLite consensus disorder prediction 36 50 - -
Dere08g0740 282 MobiDBLite consensus disorder prediction 27 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0740 Dere-ChrDere08 11182698 11189358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0740 49 282 Miscellaneous Gene Families AT2G20840 67.094 1.11e-113 325
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0740 08 11182698 11189358 Dere07g0408 07 6958035 6963996 CCT