Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0564 ATGACTAGTTCTAAGAGGCTTGAGGTGCAGACAGACGATCAAACTCCACATAAATGGTGCATTTCATTGGGAGAAGAGGTATTCAAGAGGTTCATCAGCCAGGTCAATCCAACAGTACATAAAAGTTTTGGTGATGGGTCACTTTTCAGTCCAATGTTGTTCGGAAAGTTCTTCGATCCTTCTGATGCCTTCCCTCTATGGGAGTTTGAGTCAGATAGCTTGTTATCCCATCTACGTAGCGCTGGCCAAAGCACAGTTGATTGGTGTCAGACAGATCAAGGTTATATATTAAAGGCAGAAATACCAGGAACTGGGAGAAATAGCATTCAAGTCCATGTTGATAATGGAAAGATTGTGGAAATTAGTGGACTGTGGAAGCAGCAGACAAGGGCAAATGATTGGAGGTGTGGCCACTGGTGGGAACATGGATATGTACGAAGGCTTGAGATGCCAGAGGATGCAGAATGGAGGAATATAGAGGCACACATATATAATGACATATTCTTAGAGATACGAATACCAAAGAGGCCACAGGGCTGTGATCCTCTCCAGGGGAAGGATGTGGCCTCAAGAAGTGCAGAATCAGTGTAA 591 0.4416 MTSSKRLEVQTDDQTPHKWCISLGEEVFKRFISQVNPTVHKSFGDGSLFSPMLFGKFFDPSDAFPLWEFESDSLLSHLRSAGQSTVDWCQTDQGYILKAEIPGTGRNSIQVHVDNGKIVEISGLWKQQTRANDWRCGHWWEHGYVRRLEMPEDAEWRNIEAHIYNDIFLEIRIPKRPQGCDPLQGKDVASRSAESV 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0564 196 PANTHER 21.7 KDA CLASS VI HEAT SHOCK PROTEIN 1 182 - -
Dere08g0564 196 SUPERFAMILY HSP20-like chaperones 51 177 IPR008978 -
Dere08g0564 196 Pfam Hsp20/alpha crystallin family 87 180 IPR002068 -
Dere08g0564 196 Gene3D - 47 181 IPR008978 -
Dere08g0564 196 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 77 191 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0564 Dere-ChrDere08 8674878 8675858 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0564 08 8674878 8675858 Dere08g0564 08 8674878 8675858 ECH