Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0551 ATGTCTATGGCAGCAGCTTCAAATCCTGTTGTTTCAACCCTCTATGCCTTTTCTGACTTCTCTCGAAATACTGCTGATTTTCATCCCAGCATATGGACTGACTATTTCCTTCAATATGCTTCACAATCTACGGAATCAACAAATGATAAAGCAGGGCACCAAATAGAGAAATTGAAAGAAGACGTGAGGAAACTGCTGATCCCTGCAACTGAGAAACCCTTATCAAAAGTAAACTTGATTGATTCAATCCAACGCTTGGGTGTGGACTACCACTTTGAATATGAGATTGATAATGTGTTGCAACATATTCACCAACATTATGTTCAAAATGGTGTAATAATAGGTCTCAATGATAACCTTTGCACTCTTGCTCTTCTCTTTAGGTTATTGAGACAACAAGGATATCGCATTTCATCGGATGCTTTTAAGAAGTTCAAGAACATGGAAGGAAACTTTGATGAAAGACTTACTGACAATGTTGAAGGAATGTTAAGCTTGTATGAAGCTGCACACCTAGGGGTTCATGGAGAGGAAATATTGGATGAAGCCCTTGCATTCACTTCTACTCAGTTAAAAGTCATGATCACCCAGTTAAAGCCTCCTCTAGTAGAGCAAGTGAACCATAGCCTAAGGCAGCCTCTGCGTAAGGGCTTGCCTAGGCTTGAGGCACGACAATACATTCCAATTTACCAACAAGATCCCTCCCATAATGGAACTCTTCTTGCTCTAGCAAAATTAGATTTCAATATGCTACAGAAGCTGCATCAAAAGGAAATTGCCTATATATGCGAGTGGTGGAAGAATTTGGATGTCCCAAGAAAACTATCTTTTGCTCGAGATAGGATTGTGGAAGGCTGCTTTTGGATTTTGGGGGTGTATTTTGAGCCCCACTACGCTCTAGCCAGAAGGATAATGACTAAAATTATAGCTCTGTCATCCATTATTGATGATATATATGATGCATATGGAACCATTGAAGAACTTGAACTTTTCACTGATGCAATTGACAGGTGGGATATCTGCTGCCTAGATTTTCTTCCCGAATATATGAAACTGTGTTACAAGGCATTATTGGATGTTTATGAAGAAATAGAGAGAGAGTTGAAGAAGGAAGGAAGGTCTTATGGCTTTAATTATGCGAAAAGTGAAATGAAAAAACTTGTTCGAGTTTACTTAACAGAAGCAAGATGGTTCAATAGCAACCATATACCAACAAGTGAGGAGTACTTGGAAATAGCGACAATGACATGTGGTTACTCAATGCTCGCCACCACTTCGTTGATTGGCATGGGACACATAGCAACTGAAGATGTCTTCAAATGGGCAACATCACAACCACAAATCATCAAAGCTTCCTCAATTGTTTGTAGGCTCATGGATGACATCGTCTCCAATGAGTTTGAGCAGAAAAGAGGGCACGTTGTGTCAATACTAGAATGCTATAGTAAGCAGCATGGTGTGTCGAGGGAAAAAGCCATTGATGAACTTCGAAACTGGATAGCAAATTCATGGAAGGATATAAATGAGGAATTCCTTAAACCTACCAAAGTGGGAATGCCTTTCCTAATGCGAGTACTTAACCTTGCTCGCTGTATGGATGTGCTTTATAAAGATGAAAGTAGCTACACACATTCTGGAGGAATTATGAAGAAGTATATTGCAGCTTTGCTTGTGGATCCTGTCCCCATTTGA 1692 0.3983 MSMAAASNPVVSTLYAFSDFSRNTADFHPSIWTDYFLQYASQSTESTNDKAGHQIEKLKEDVRKLLIPATEKPLSKVNLIDSIQRLGVDYHFEYEIDNVLQHIHQHYVQNGVIIGLNDNLCTLALLFRLLRQQGYRISSDAFKKFKNMEGNFDERLTDNVEGMLSLYEAAHLGVHGEEILDEALAFTSTQLKVMITQLKPPLVEQVNHSLRQPLRKGLPRLEARQYIPIYQQDPSHNGTLLALAKLDFNMLQKLHQKEIAYICEWWKNLDVPRKLSFARDRIVEGCFWILGVYFEPHYALARRIMTKIIALSSIIDDIYDAYGTIEELELFTDAIDRWDICCLDFLPEYMKLCYKALLDVYEEIERELKKEGRSYGFNYAKSEMKKLVRVYLTEARWFNSNHIPTSEEYLEIATMTCGYSMLATTSLIGMGHIATEDVFKWATSQPQIIKASSIVCRLMDDIVSNEFEQKRGHVVSILECYSKQHGVSREKAIDELRNWIANSWKDINEEFLKPTKVGMPFLMRVLNLARCMDVLYKDESSYTHSGGIMKKYIAALLVDPVPI 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0551 563 CDD Terpene_cyclase_plant_C1 22 560 IPR044814 GO:0010333|GO:0016102
Dere08g0551 563 Gene3D - 71 236 IPR036965 GO:0010333|GO:0016829
Dere08g0551 563 SFLD Isoprenoid Synthase Type I 236 562 - -
Dere08g0551 563 Pfam Terpene synthase family, metal binding domain 241 506 IPR005630 GO:0000287|GO:0010333|GO:0016829
Dere08g0551 563 SFLD Terpene Cyclase Like 1 C Terminal Domain 236 562 IPR034741 -
Dere08g0551 563 FunFam Isoprene synthase, chloroplastic 71 236 - -
Dere08g0551 563 Pfam Terpene synthase, N-terminal domain 31 210 IPR001906 GO:0010333|GO:0016829
Dere08g0551 563 SUPERFAMILY Terpenoid synthases 236 561 IPR008949 -
Dere08g0551 563 FunFam Isoprene synthase, chloroplastic 224 551 - -
Dere08g0551 563 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 28 236 IPR008930 -
Dere08g0551 563 PANTHER OS04G0344100 PROTEIN-RELATED 22 560 - -
Dere08g0551 563 Gene3D Farnesyl Diphosphate Synthase 29 551 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0551 Dere-ChrDere08 8529141 8532410 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0551 08 8529141 8532410 Dere08g0551 08 8529141 8532410 ECH