Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0536 ATGCCTGAGGCTCCCATGGTCTTCAACCTCGCAGAGCACAACAAGAAAGCTCTTCAGTTCATAGAAGATGTCACTGCCAACGCCGACGAATTCCAGAATAAGGTCCTCGCCGAAATTCTCTCCAGTAATGCCAGCGTTGAGTACCTGCAGAGACACGGCCTCAATGGCCGCAGCGACCGCGAAACTTTCAAGAAACTTCTCCCCCTCATCACCTACGAGGATATCCAGTCCGACGTCAACCGCATCGCCAATGGCGACACTTCTCCCATCCTCTGCTCCAACCCCATTTCTGAGTTTCTCACTAGCTCTGGGACATCAGGAGGGGAAAGAAAGCTGATGCCTACGATTGAAGAAGAGAGTGGGAGAAGGAGTTCGCTTTATAGCCTGTTGATGCCTGTAATGAGCCAGTTTCTGCCTGGCCAAGAAAAAGGCAAAGGAATGTACTTTTGCTTCATAAAATCTGAGGCTAAAACACCTGGAGGACTCTTGGCTCGTCCAGTTCTCACTAGCTATTACAAAAGCCCCCATTTCAAAAACAGATCACTCACCGATCCTTACGCAAACTACACCAGTCCGATTGAAACCATCCTCTGTCCTGATTCTTACCAAAGCATGTACTCCCAGTTACTCTGTGGTCTCTCCCAAAACGATGTCGTCCTTCGGGTCGGTGCTGTTTTCGCCTCTGCCTTCATTCGGGCAATTCGCTTCCTCGAGAAACACTGGGCCCTTCTTTGCAACGACATTAGAACAGGAACCCTTAACCCCGAGATCACAGACACCTCCGTGCGAGATTCTGTCATGAAGATCCTCAAACCCGACCGGAATCTCGCGGATTTTATCGAGTCCGAGTGTAGCAAAAATTGCTGGCGGGGGATCATCACCCGGCTGTGGCCCAACACCAAGTATGTGGATGTTATTGTGACGGGAACAATGTCACAGTACATTCCCACACTGGATTACTACAGCAATGGCCTCCCTCTCGCCAGCACTATGTATGCTTCTAGCGAATGCTACTTCGGACTCAATCTCAGCCCTCTTTGCAAACCCAGCGAAGTATCTTACACCCTCATTCCTACCATGGGATACTTCGAATTCCTTCCACTTAACAGAACCAATGGACTCACCGATTCTCTTCCTCAGAAACATCAAGAAGAATTGGTGGACCTTGTGGATGTCAAGCTCGGTCAAGAATACGAGCTCGTTGTCACAACCTTCGCCGGGCTTTATAGGTACAGAGTGGGAGACGTGCTGAGAGTGGCGGGATTCAAGAACAAGGCTCCCCAATTCAACTTCATATGCAGGAAGAACGTGGTGCTGAGCATTGATTCAGACAAAACGGACGAGGTTGAGCTTCAGTACGCATTAAAAAATGCGGTGACCCATTTGGCTCCATTTGATGCAGACGTGGCTGACTACACTAGCTATGCGGATACGACGACAATCCCAGGGCACTATGTGCTTTACTGGGAGCTCGCGCTCAATGGGGCAACTCCGATTCCTGCCAGTGTGTTCGAGGATTGCTGCTTAACCATTGAAGAATCACTGAACAGTGTGTATCGCCAAGGGCGTGTCTCCGACAAATCAATAGGGCCACTTGAAATCAAGATTGTGGAACAGGGGACGTTTGATAAGCTCATGGATTATGCTATTAGCTTAGGGGCATCTATAAACCAGTACAAGACACCTAGGTGCGTCAAATTTGCACCTGTCGTGGAGCTGTTGAACTCGAGGGTAGTGGCAACCTATTTTAGTCCGAAATGTCCAAAATGGGTTCCGGGACACAAGCAATGGATCAATCAGAATTGA 1806 0.4917 MPEAPMVFNLAEHNKKALQFIEDVTANADEFQNKVLAEILSSNASVEYLQRHGLNGRSDRETFKKLLPLITYEDIQSDVNRIANGDTSPILCSNPISEFLTSSGTSGGERKLMPTIEEESGRRSSLYSLLMPVMSQFLPGQEKGKGMYFCFIKSEAKTPGGLLARPVLTSYYKSPHFKNRSLTDPYANYTSPIETILCPDSYQSMYSQLLCGLSQNDVVLRVGAVFASAFIRAIRFLEKHWALLCNDIRTGTLNPEITDTSVRDSVMKILKPDRNLADFIESECSKNCWRGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLASTMYASSECYFGLNLSPLCKPSEVSYTLIPTMGYFEFLPLNRTNGLTDSLPQKHQEELVDLVDVKLGQEYELVVTTFAGLYRYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQYALKNAVTHLAPFDADVADYTSYADTTTIPGHYVLYWELALNGATPIPASVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEQGTFDKLMDYAISLGASINQYKTPRCVKFAPVVELLNSRVVATYFSPKCPKWVPGHKQWINQN 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0536 601 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 14 587 IPR004993 -
Dere08g0536 601 Pfam GH3 auxin-responsive promoter 21 566 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0536 Dere-ChrDere08 8275933 8277965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0536 9 584 EF-hand Containing Proteins AT1G23160 50.598 0.0 578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0536 08 8275933 8277965 Dere08g0536 08 8275933 8277965 ECH