Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0458 ATGGATCGGCTGCTAAAAGCTGCAAGAGCATCCGGTTCCCTCAACCTCTCTAATCGCTCGCTCAGGGAAGTTCCCAATGAGGTTTACCGGAATCTGGAAGGACTTGGTGACGATGATAAGTGGTGGGAGGCCGTGGAGCTCCAAAAGCTCATTTTGGCGCATAATGATATTCAATCATTAAAGGAAGATCTTAGAAACTTACCTTCACTGATTGTGTTGAATGTTAGCCACAACAGACTTTCCGAGCTTCCAGCTGCAATAGGAGAGCTGCCTCAGCTAAAGTTGTTAGATGTGTCGTTCAATTTGATACATAAGATACCAGAGGAAATTGGATCAGCAGCATCCCTTGTAAAGTTTGAGTTCTCAAACAATCAGCTCAAGGAGCTTCCAAGCTCACTAGGCCAATGTTTAGAATTGTCAGAATTGAAGGGATCAAACAACCTCATTGCCAGCTTGCCAGATGATTTAGCACATTGTTCAAAATTGACAAAACTAGACATGGAGGGAAACAAGCTAACGGTGATACCTGAAAAGCTCATTTCATCATGGACCATGCTTACTGAATTGAATGCATCAAAAAATTTGCTGAATGGCATACCAGTCAGTATTGGAGGCCTTTCTCATCTAATTCGTCTTGACCTCCATCAGAACAGAATCTCATCAATCCCATCATCAATCATGGGTTGCCATTCACTTGCAGAATTTTATTTGGGGAATAACAACCTTTCTGCAGTCCCAGTGGAGATAGGGACCCTATCACGACTTGGGACTTTAGATCTTCACTCTAACCGGCTGAAGGAGTATCCAGTAGAGGCATGCAAATTGGTTCTTTCAGTCTTAGATCTTTCAAACAATTCATTGAGTGGGTTACCCCCTGAATTGGGCAAGATGACTACCTTGAGGAGACTTCTGCTTACTGGCAATCCCTTGCGGACTCTTCGAAGTTCATTAGTCTCTGGACCTACTCCAGCACTCCTGAAATTTCTTCAAAGTAGACTTTCTGAAGCTGAAGATTCTGAATCCACAATTACGACAAAAGAAGATGTAATTGCAAAGGCCACTAGACTGTCTATCACTTCAAAGGAACTTTCTTTGGAAGGGCTGGGGTTGAGTGCCATTCCATCTGAAGTATGGGAATCAGGGGAGGTTGTCAAAGTTGATCTTTCAAGAAATTCCATTGAGGAGTTGCCAGTTGAGCTTTCTTCTTGTGTTTCCCTCCAGACTATGATTTTATCTAGGAATAAAATAAAAGAGTGGCCGGGTTCAATTCTTAAATCACTTTCAAGTCTTTCTTGTTTGAAGCTGGACAACAATCCCCTCAGACAGATTCCTTCGGATGGTTTCGAAACTGTGCCTAGGCTTCAGATTCTTGATCTAAGTGGTAATGCAGCTTCACTGCTGAATGGTCCTGCATTTTCTAGTATGCCACATCTGCAAGAGCTTTACCTAAGAAGAATGCAACTCACTGAAGTCCCATCAGATGTATTGATGCTGCTTCAACTGCAAGTCCTTGACTTGAGTCAAAATTCCCTTCAATCAATCCCAGTGGAGTTCAAAAATCTCACTTCTCTCACAGAGCTTGACCTGTCTAATAATAACATCTCAGCCCTTCCCCCTGAGCTGGGTTTGCTTGAACCAAGCCTTCAGGCATTGAGACTTGATGGAAATCCACTCAGAAGCATTCGGAGGACTATCTTGGATAAAGGAACTAAAGCTGTTCTGAAATATTTGAAGGACAAATTACCAGAATTTAAGGTTTCTGGCGCCGTAGCAGATGACCACGTTTCGACAATCTCGACGACAAAAGAAGAGAACAGAACCACAAGCGACATGCGAAAGTCAGTGCTTTTGGAGGTATCCAGAAACCATGAAATTCCACGCTCTGAGATTCCTTCGTCTCTCGGTCTAGAGAGAGAAAGATTCTGA 1926 0.4304 MDRLLKAARASGSLNLSNRSLREVPNEVYRNLEGLGDDDKWWEAVELQKLILAHNDIQSLKEDLRNLPSLIVLNVSHNRLSELPAAIGELPQLKLLDVSFNLIHKIPEEIGSAASLVKFEFSNNQLKELPSSLGQCLELSELKGSNNLIASLPDDLAHCSKLTKLDMEGNKLTVIPEKLISSWTMLTELNASKNLLNGIPVSIGGLSHLIRLDLHQNRISSIPSSIMGCHSLAEFYLGNNNLSAVPVEIGTLSRLGTLDLHSNRLKEYPVEACKLVLSVLDLSNNSLSGLPPELGKMTTLRRLLLTGNPLRTLRSSLVSGPTPALLKFLQSRLSEAEDSESTITTKEDVIAKATRLSITSKELSLEGLGLSAIPSEVWESGEVVKVDLSRNSIEELPVELSSCVSLQTMILSRNKIKEWPGSILKSLSSLSCLKLDNNPLRQIPSDGFETVPRLQILDLSGNAASLLNGPAFSSMPHLQELYLRRMQLTEVPSDVLMLLQLQVLDLSQNSLQSIPVEFKNLTSLTELDLSNNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDKGTKAVLKYLKDKLPEFKVSGAVADDHVSTISTTKEENRTTSDMRKSVLLEVSRNHEIPRSEIPSSLGLERERF 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0458 641 PRINTS Leucine-rich repeat signature 521 534 - -
Dere08g0458 641 PRINTS Leucine-rich repeat signature 277 290 - -
Dere08g0458 641 Gene3D Ribonuclease Inhibitor 1 175 IPR032675 -
Dere08g0458 641 SUPERFAMILY L domain-like 14 319 - -
Dere08g0458 641 ProSiteProfiles Leucine-rich repeat profile. 500 521 IPR001611 GO:0005515
Dere08g0458 641 ProSiteProfiles Leucine-rich repeat profile. 523 544 IPR001611 GO:0005515
Dere08g0458 641 ProSiteProfiles Leucine-rich repeat profile. 46 68 IPR001611 GO:0005515
Dere08g0458 641 Gene3D Ribonuclease Inhibitor 348 467 IPR032675 -
Dere08g0458 641 Gene3D Ribonuclease Inhibitor 271 335 IPR032675 -
Dere08g0458 641 Gene3D Ribonuclease Inhibitor 176 270 IPR032675 -
Dere08g0458 641 Gene3D Ribonuclease Inhibitor 468 580 IPR032675 -
Dere08g0458 641 ProSiteProfiles Leucine-rich repeat profile. 208 229 IPR001611 GO:0005515
Dere08g0458 641 FunFam Leucine-rich repeat-containing protein 40 472 580 - -
Dere08g0458 641 SMART LRR_typ_2 498 520 IPR003591 -
Dere08g0458 641 SMART LRR_typ_2 427 450 IPR003591 -
Dere08g0458 641 SMART LRR_typ_2 90 113 IPR003591 -
Dere08g0458 641 SMART LRR_typ_2 114 136 IPR003591 -
Dere08g0458 641 SMART LRR_typ_2 521 544 IPR003591 -
Dere08g0458 641 SMART LRR_typ_2 159 182 IPR003591 -
Dere08g0458 641 SMART LRR_typ_2 404 426 IPR003591 -
Dere08g0458 641 SMART LRR_typ_2 546 568 IPR003591 -
Dere08g0458 641 SMART LRR_typ_2 451 474 IPR003591 -
Dere08g0458 641 SMART LRR_typ_2 206 229 IPR003591 -
Dere08g0458 641 SMART LRR_typ_2 277 296 IPR003591 -
Dere08g0458 641 SMART LRR_typ_2 45 66 IPR003591 -
Dere08g0458 641 SMART LRR_typ_2 67 88 IPR003591 -
Dere08g0458 641 SMART LRR_typ_2 252 275 IPR003591 -
Dere08g0458 641 SMART LRR_typ_2 475 497 IPR003591 -
Dere08g0458 641 SMART LRR_typ_2 297 320 IPR003591 -
Dere08g0458 641 SMART LRR_typ_2 381 403 IPR003591 -
Dere08g0458 641 SUPERFAMILY L domain-like 361 559 - -
Dere08g0458 641 SMART LRR_bac_2 206 225 - -
Dere08g0458 641 SMART LRR_bac_2 159 178 - -
Dere08g0458 641 SMART LRR_bac_2 113 132 - -
Dere08g0458 641 SMART LRR_bac_2 186 202 - -
Dere08g0458 641 SMART LRR_bac_2 521 541 - -
Dere08g0458 641 SMART LRR_bac_2 498 517 - -
Dere08g0458 641 SMART LRR_bac_2 67 86 - -
Dere08g0458 641 SMART LRR_bac_2 475 494 - -
Dere08g0458 641 SMART LRR_bac_2 90 109 - -
Dere08g0458 641 Pfam Leucine rich repeat 186 242 IPR001611 GO:0005515
Dere08g0458 641 Pfam Leucine rich repeat 254 310 IPR001611 GO:0005515
Dere08g0458 641 Pfam Leucine rich repeat 46 103 IPR001611 GO:0005515
Dere08g0458 641 Pfam Leucine rich repeat 476 534 IPR001611 GO:0005515
Dere08g0458 641 PANTHER - 122 312 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0458 49 541 Receptor kinase-like Gene Family AT4G08850 29.783 2.06e-31 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0458 08 7022268 7036868 Dere08g0458 08 7022268 7036868 ECH