Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0455 ATGGCCGACCGTTTCTTTCCTAACGAAATGCCACAATTCGTTGCGGAGACAAATGTTGAGGAAACTGCCTCTCAAGGAGCAAGAGACTCACTCACGAAGCTCCTCTCTCTTCCTTACATGACCTTCTCTTCGAAAATCCAAAAAGCAGCCTTGGACTTGAAAGAATCGGTGGTGAGGGAGACATGGGGGTCGAGTGGAAAGCGCGTGAGGGATTATACCCTGTATACAGGAGCTCTTGGGACAGCGTACCTGCTATTTAAAGCTTACCAAGTTACAAATGATAGGAATGATCTTAACTTAAGCTCACAGATCATCAAAGCTTGTGATTCTGCTTCAATAGATTCTAGCCGAATCACATTCTTATGTGGGCGTGCTGGTGTTTGTGCTCTTGGTGCTGTCATATCTAAGCATGCTGGTGATGCAAGGCTGCTTGAATATTACTTGGGACAATTCCATGAGATCAGACTACCTCGTGATTTGCCCTATGAGCTATTGTATGGCAGAGCAGGGTACTTATGGGCTTGTTCATTCTTAAACAAGCATATTGGTAAAGACACAATATCTACTACCCACATGAGGTCAATTGTCGATGAAGTTATTGCAGCTGGTAGACAACTGGCCCACAGGGGAAGATGTCCTCTGATGTATGAATGGCATGGGAAGAAATATTGGGGTGCTGCTCATGGACTAGCAGGAATAATGTATGTTTTGATGGACATGGAACTAAAGCCAGATGAGGTAGAAGATGTCAAGGGTACACTAAATTACATGATTAAAAATCGTTTCCCCAGTGGCAATTATCGCTCAAGTGAAGGAAACGAATCTGACCGTCTTGTGCATTGGTGTCATGGTGCTCCTGGAATCACTCTTACACTTGTAAAAGCAGCTGAGGTTTTTGGGGACAAGGATTTTTTGCAAGCAGCAACCGATGCAGGAGAAGTAGTATGGAACAGGGGTCTGCTTAAGCGAGTTGGGATTTGCCATGGCATCAGTGGGAACACCTATGTCTTTCTTTCACTGTACCGGTTAACAGGGAATCCGGAGTACTTGTACAGAGCTAAAGCATTTGCTTGTTTTCTACTTGATAGAGCGCAAAATTTGATCTTGGAAGGAAAGATGCATGGAGGAGATCGCCCTTATTCAATGTTTGAAGGTCTTGGAGGAATGGCTTATATATTTCTAGACATGATAGATCCTAAAATAGCCAAATTCCCAGCCTACGAACTTTGA 1230 0.439 MADRFFPNEMPQFVAETNVEETASQGARDSLTKLLSLPYMTFSSKIQKAALDLKESVVRETWGSSGKRVRDYTLYTGALGTAYLLFKAYQVTNDRNDLNLSSQIIKACDSASIDSSRITFLCGRAGVCALGAVISKHAGDARLLEYYLGQFHEIRLPRDLPYELLYGRAGYLWACSFLNKHIGKDTISTTHMRSIVDEVIAAGRQLAHRGRCPLMYEWHGKKYWGAAHGLAGIMYVLMDMELKPDEVEDVKGTLNYMIKNRFPSGNYRSSEGNESDRLVHWCHGAPGITLTLVKAAEVFGDKDFLQAATDAGEVVWNRGLLKRVGICHGISGNTYVFLSLYRLTGNPEYLYRAKAFACFLLDRAQNLILEGKMHGGDRPYSMFEGLGGMAYIFLDMIDPKIAKFPAYEL 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0455 409 PRINTS Eukaryotic LanC-like protein family signature 295 316 IPR020464 -
Dere08g0455 409 PRINTS Eukaryotic LanC-like protein family signature 212 224 IPR020464 -
Dere08g0455 409 PRINTS Eukaryotic LanC-like protein family signature 258 273 IPR020464 -
Dere08g0455 409 PRINTS Eukaryotic LanC-like protein family signature 2 15 IPR020464 -
Dere08g0455 409 PRINTS Eukaryotic LanC-like protein family signature 340 358 IPR020464 -
Dere08g0455 409 CDD euk_LANCL 74 405 - -
Dere08g0455 409 PANTHER LANC-LIKE PROTEIN 1 409 - -
Dere08g0455 409 FunFam LanC-like protein 2 1 409 - -
Dere08g0455 409 Pfam Lanthionine synthetase C-like protein 70 409 IPR007822 GO:0031179
Dere08g0455 409 SMART LANC_like_2 68 409 IPR007822 GO:0031179
Dere08g0455 409 Gene3D - 1 409 IPR012341 GO:0005975
Dere08g0455 409 PRINTS LanC-like protein superfamily signature 162 177 IPR007822 GO:0031179
Dere08g0455 409 PRINTS LanC-like protein superfamily signature 278 298 IPR007822 GO:0031179
Dere08g0455 409 PRINTS LanC-like protein superfamily signature 324 337 IPR007822 GO:0031179
Dere08g0455 409 PRINTS LanC-like protein superfamily signature 71 89 IPR007822 GO:0031179
Dere08g0455 409 PRINTS LanC-like protein superfamily signature 223 239 IPR007822 GO:0031179
Dere08g0455 409 PRINTS LanC-like protein superfamily signature 379 396 IPR007822 GO:0031179
Dere08g0455 409 SUPERFAMILY LanC-like 68 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0455 Dere-ChrDere08 7011700 7014808 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0455 08 7011700 7014808 Dere08g0455 08 7011700 7014808 ECH