Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0454 ATGGCTCTCCAGGCTGCTGCTTCACTGGTTCCCGCTCCTTTCTCCATCCCCAAAGAGGGAAAATTTGGTGTCTCTCTCAAGGACTCTGCCCTATTTGGGCTTTCATTATCAGATAATCTCAGAGCTGGCTTCAGCTCTTCTGCATTGAGGTGTAAGCAAAAAGTTGGTGCTGTGAGGGCCCAGACAGCGGCTACTACAACTCCAGCAGTTAACAGGGCTGCTCCTGAAGGCAAGAAAACGCTGAGGAAGGGAAGTGTTGTGGTCACTGGGGCCTCCTCCGGATTGGGTCTAGCCACTGCTAAGGCTTTGGCTGAGACAGGAAAATGGCATGTGATTATGGCCTGCAGGGACTTCCTCAAAGCCGAAAGAGCTGCCAAATCAGCTGGCATGGCTAAGGAAAACTACAGCATAATGCATTTAGACCTTGCCTCTCTTGACAGTGTCCGTCAATTTGTAGATAACTTCAGGCGATCAGGCAGGCCACTTGATGTTCTGGTCTGCAATGCTGCTGTTTACTTGCCAACTGCTAAGGAACCTACATTTACTGCTGAAGGCTTTGAACTCAGTGTTGGGACAAACCATCTGGGGCATTTTCTCCTTTCACGCTTGCTGCTTGAGGACTTGAACAAATCTGATTATCCATCAAGGCGCTTGATCATTGTTGGTTCAATCACAGGAAACACTAATACATTGGCTGGAAACGTGCCTCCCAAGGCAAACCTTGGTGACATGAGGGGTCTTGCAGGTGGATTAAATGGGCTTAACAGTTCATCTATGATTGATGGTGGAGACTTTGATGGTGCCAAGGCATACAAGGACAGCAAAGTCTGCAATATGCTCACCATGCAAGAGTTCCACAGAAGATACCATGAGGAAACTGGGATCACATTTGCTTCCCTTTACCCGGGTTGCATAGCCACAACTGGCTTGTTTAGAGAGCACATTCCCTTGTTCAGACTTTTGTTTCCTCCATTCCAAAAGTACATAACCAAAGGCTATGTCTCAGAAGATGATGCAGGGAAGAGACTTGCTCAGGTTGTGAGTGATCCAAGCCTGACAAAATCCGGTGTTTACTGGAGCTGGAACAAGGACTCTGCTTCATTTGAAAACCAGTTGTCGCAAGAGGCTAGTGATGCAGAGAAGGCTCGCAAGGTATGGGAAATCAGCGAGAAACTTGTTGGCTTGGCCTAA 1191 0.4794 MALQAAASLVPAPFSIPKEGKFGVSLKDSALFGLSLSDNLRAGFSSSALRCKQKVGAVRAQTAATTTPAVNRAAPEGKKTLRKGSVVVTGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAKSAGMAKENYSIMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFLLSRLLLEDLNKSDYPSRRLIIVGSITGNTNTLAGNVPPKANLGDMRGLAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDDAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDAEKARKVWEISEKLVGLA 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0454 396 PRINTS Glucose/ribitol dehydrogenase family signature 293 310 IPR002347 -
Dere08g0454 396 PRINTS Glucose/ribitol dehydrogenase family signature 85 102 IPR002347 -
Dere08g0454 396 PRINTS Glucose/ribitol dehydrogenase family signature 160 171 IPR002347 -
Dere08g0454 396 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 81 364 IPR036291 -
Dere08g0454 396 PANTHER PROTOCHLOROPHYLLIDE REDUCTASE C, CHLOROPLASTIC 1 396 IPR005979 GO:0016630
Dere08g0454 396 Pfam short chain dehydrogenase 86 228 IPR002347 -
Dere08g0454 396 NCBIfam protochlorophyllide reductase 82 396 IPR005979 GO:0016630
Dere08g0454 396 Gene3D - 74 396 - -
Dere08g0454 396 CDD LPOR_like_SDR_c_like 83 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0454 Dere-ChrDere08 7008917 7010805 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0454 08 7008917 7010805 Dere08g0454 08 7008917 7010805 ECH